Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Abca8aQ8K442 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Abca8aQ8K442 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC28.35■■■□□ 2.13
Abca8aQ8K442 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Abca8aQ8K442 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8aQ8K442 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8aQ8K442 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8aQ8K442 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8aQ8K442 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC28.34■■■□□ 2.13
Abca8aQ8K442 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8aQ8K442 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Abca8aQ8K442 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8aQ8K442 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Abca8aQ8K442 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC28.33■■■□□ 2.13
Abca8aQ8K442 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC28.33■■■□□ 2.13
Abca8aQ8K442 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC28.33■■■□□ 2.13
Abca8aQ8K442 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Abca8aQ8K442 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Abca8aQ8K442 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8aQ8K442 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC28.32■■■□□ 2.12
Abca8aQ8K442 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC28.32■■■□□ 2.12
Abca8aQ8K442 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
Abca8aQ8K442 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8aQ8K442 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC28.32■■■□□ 2.12
Abca8aQ8K442 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8aQ8K442 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC28.32■■■□□ 2.12
Abca8aQ8K442 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC28.32■■■□□ 2.12
Abca8aQ8K442 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8aQ8K442 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8aQ8K442 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8aQ8K442 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8aQ8K442 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8aQ8K442 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC28.31■■■□□ 2.12
Abca8aQ8K442 Ap3s1-204ENSMUST00000225520 957 ntBASIC28.31■■■□□ 2.12
Abca8aQ8K442 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8aQ8K442 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Abca8aQ8K442 Reep4-203ENSMUST00000226563 1444 ntBASIC28.31■■■□□ 2.12
Abca8aQ8K442 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca8aQ8K442 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca8aQ8K442 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca8aQ8K442 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca8aQ8K442 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca8aQ8K442 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Abca8aQ8K442 Gm13234-201ENSMUST00000120010 747 ntBASIC28.29■■■□□ 2.12
Abca8aQ8K442 CT030146.1-201ENSMUST00000220919 217 ntBASIC28.29■■■□□ 2.12
Abca8aQ8K442 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Abca8aQ8K442 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca8aQ8K442 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca8aQ8K442 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Abca8aQ8K442 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Abca8aQ8K442 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8aQ8K442 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8aQ8K442 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8aQ8K442 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8aQ8K442 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8aQ8K442 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8aQ8K442 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Abca8aQ8K442 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Abca8aQ8K442 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Abca8aQ8K442 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Abca8aQ8K442 Gm12933-201ENSMUST00000120203 872 ntBASIC28.25■■■□□ 2.11
Abca8aQ8K442 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Gm10571-201ENSMUST00000097869 1638 ntBASIC28.25■■■□□ 2.11
Abca8aQ8K442 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Abca8aQ8K442 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8aQ8K442 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Abca8aQ8K442 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8aQ8K442 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC28.24■■■□□ 2.11
Abca8aQ8K442 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC28.24■■■□□ 2.11
Abca8aQ8K442 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8aQ8K442 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8aQ8K442 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8aQ8K442 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8aQ8K442 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8aQ8K442 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8aQ8K442 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC28.23■■■□□ 2.11
Abca8aQ8K442 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8aQ8K442 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC28.22■■■□□ 2.11
Abca8aQ8K442 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Abca8aQ8K442 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC28.22■■■□□ 2.11
Abca8aQ8K442 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Abca8aQ8K442 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8aQ8K442 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8aQ8K442 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms