Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcll1Q8JZS7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcll1Q8JZS7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcll1Q8JZS7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcll1Q8JZS7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcll1Q8JZS7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.73■□□□□ 0.91
Hmgcll1Q8JZS7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcll1Q8JZS7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcll1Q8JZS7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Hmgcll1Q8JZS7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Smad6-203ENSMUST00000179458 273 ntBASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcll1Q8JZS7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcll1Q8JZS7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcll1Q8JZS7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcll1Q8JZS7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcll1Q8JZS7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcll1Q8JZS7 Gm26833-201ENSMUST00000180899 440 ntBASIC20.71■□□□□ 0.91
Hmgcll1Q8JZS7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
Hmgcll1Q8JZS7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcll1Q8JZS7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcll1Q8JZS7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcll1Q8JZS7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcll1Q8JZS7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcll1Q8JZS7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcll1Q8JZS7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcll1Q8JZS7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcll1Q8JZS7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.67■□□□□ 0.9
Hmgcll1Q8JZS7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcll1Q8JZS7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Hmgcll1Q8JZS7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcll1Q8JZS7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcll1Q8JZS7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcll1Q8JZS7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcll1Q8JZS7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hmgcll1Q8JZS7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcll1Q8JZS7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcll1Q8JZS7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.64■□□□□ 0.9
Hmgcll1Q8JZS7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmgcll1Q8JZS7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms