Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp1Q8C8C1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp1Q8C8C1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp1Q8C8C1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp1Q8C8C1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp1Q8C8C1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp1Q8C8C1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp1Q8C8C1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp1Q8C8C1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp1Q8C8C1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rtp1Q8C8C1 Reep4-203ENSMUST00000226563 1444 ntBASIC23.08■■□□□ 1.29
Rtp1Q8C8C1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rtp1Q8C8C1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Rtp1Q8C8C1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Rtp1Q8C8C1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
Rtp1Q8C8C1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Rtp1Q8C8C1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.08■■□□□ 1.28
Rtp1Q8C8C1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.08■■□□□ 1.28
Rtp1Q8C8C1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp1Q8C8C1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp1Q8C8C1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp1Q8C8C1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp1Q8C8C1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp1Q8C8C1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rtp1Q8C8C1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Gm20760-201ENSMUST00000179197 648 ntBASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rtp1Q8C8C1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Rtp1Q8C8C1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp1Q8C8C1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp1Q8C8C1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp1Q8C8C1 Mir5133-201ENSMUST00000174955 77 ntBASIC23.04■■□□□ 1.28
Rtp1Q8C8C1 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.04■■□□□ 1.28
Rtp1Q8C8C1 Gm4968-201ENSMUST00000071458 858 ntBASIC23.04■■□□□ 1.28
Rtp1Q8C8C1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Mir7071-201ENSMUST00000184847 69 ntBASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Gm7514-201ENSMUST00000209475 934 ntBASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.03■■□□□ 1.28
Rtp1Q8C8C1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtp1Q8C8C1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Rtp1Q8C8C1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp1Q8C8C1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtp1Q8C8C1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23■■□□□ 1.27
Rtp1Q8C8C1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtp1Q8C8C1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtp1Q8C8C1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23■■□□□ 1.27
Rtp1Q8C8C1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms