Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.28■□□□□ 0.84
Cachd1Q6PDJ1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cachd1Q6PDJ1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Cachd1Q6PDJ1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cachd1Q6PDJ1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cachd1Q6PDJ1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cachd1Q6PDJ1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 Trmt13-210ENSMUST00000198454 880 ntBASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cachd1Q6PDJ1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cachd1Q6PDJ1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cachd1Q6PDJ1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cachd1Q6PDJ1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cachd1Q6PDJ1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cachd1Q6PDJ1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cachd1Q6PDJ1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cachd1Q6PDJ1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cachd1Q6PDJ1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cachd1Q6PDJ1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cachd1Q6PDJ1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cachd1Q6PDJ1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cachd1Q6PDJ1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cachd1Q6PDJ1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cachd1Q6PDJ1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cachd1Q6PDJ1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.19■□□□□ 0.82
Cachd1Q6PDJ1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cachd1Q6PDJ1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cachd1Q6PDJ1 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.19■□□□□ 0.82
Cachd1Q6PDJ1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cachd1Q6PDJ1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cachd1Q6PDJ1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms