Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Foxc1Q61572 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.55□□□□□ -0.08
Foxc1Q61572 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.55□□□□□ -0.08
Foxc1Q61572 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Foxc1Q61572 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxc1Q61572 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxc1Q61572 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxc1Q61572 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxc1Q61572 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxc1Q61572 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxc1Q61572 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Foxc1Q61572 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Foxc1Q61572 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Foxc1Q61572 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.53□□□□□ -0.08
Foxc1Q61572 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.53□□□□□ -0.08
Foxc1Q61572 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.53□□□□□ -0.08
Foxc1Q61572 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Foxc1Q61572 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.53□□□□□ -0.08
Foxc1Q61572 Golgb1-201ENSMUST00000023534 498 ntBASIC14.53□□□□□ -0.08
Foxc1Q61572 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxc1Q61572 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxc1Q61572 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxc1Q61572 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxc1Q61572 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Foxc1Q61572 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Foxc1Q61572 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.52□□□□□ -0.08
Foxc1Q61572 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxc1Q61572 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.52□□□□□ -0.09
Foxc1Q61572 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Foxc1Q61572 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.52□□□□□ -0.09
Foxc1Q61572 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxc1Q61572 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Foxc1Q61572 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxc1Q61572 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxc1Q61572 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.51□□□□□ -0.09
Foxc1Q61572 Gm27454-201ENSMUST00000185090 204 ntBASIC14.51□□□□□ -0.09
Foxc1Q61572 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.51□□□□□ -0.09
Foxc1Q61572 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxc1Q61572 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxc1Q61572 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Foxc1Q61572 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxc1Q61572 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Foxc1Q61572 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.51□□□□□ -0.09
Foxc1Q61572 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxc1Q61572 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Foxc1Q61572 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.5□□□□□ -0.09
Foxc1Q61572 Gm45417-201ENSMUST00000209533 758 ntBASIC14.5□□□□□ -0.09
Foxc1Q61572 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxc1Q61572 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxc1Q61572 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Foxc1Q61572 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Foxc1Q61572 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms