Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox17Q61473 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Sox17Q61473 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox17Q61473 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox17Q61473 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox17Q61473 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox17Q61473 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox17Q61473 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox17Q61473 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sox17Q61473 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox17Q61473 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox17Q61473 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox17Q61473 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox17Q61473 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sox17Q61473 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox17Q61473 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox17Q61473 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox17Q61473 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox17Q61473 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox17Q61473 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox17Q61473 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox17Q61473 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox17Q61473 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.74■□□□□ 0.59
Sox17Q61473 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sox17Q61473 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox17Q61473 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.73■□□□□ 0.59
Sox17Q61473 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.73■□□□□ 0.59
Sox17Q61473 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox17Q61473 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox17Q61473 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.72■□□□□ 0.59
Sox17Q61473 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox17Q61473 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox17Q61473 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox17Q61473 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.72■□□□□ 0.59
Sox17Q61473 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox17Q61473 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
Sox17Q61473 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox17Q61473 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox17Q61473 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox17Q61473 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.71■□□□□ 0.59
Sox17Q61473 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox17Q61473 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Sox17Q61473 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox17Q61473 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.71■□□□□ 0.59
Sox17Q61473 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sox17Q61473 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox17Q61473 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.71■□□□□ 0.59
Sox17Q61473 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox17Q61473 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox17Q61473 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.7■□□□□ 0.58
Sox17Q61473 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox17Q61473 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sox17Q61473 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.7■□□□□ 0.58
Sox17Q61473 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox17Q61473 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox17Q61473 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox17Q61473 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox17Q61473 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox17Q61473 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox17Q61473 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Gm11175-201ENSMUST00000116172 543 ntBASIC18.69■□□□□ 0.58
Sox17Q61473 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox17Q61473 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sox17Q61473 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Sox17Q61473 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.68■□□□□ 0.58
Sox17Q61473 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox17Q61473 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox17Q61473 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Sox17Q61473 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Sox17Q61473 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox17Q61473 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox17Q61473 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox17Q61473 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox17Q61473 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox17Q61473 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sox17Q61473 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms