Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcaP82350 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.71■□□□□ 0.27
SgcaP82350 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
SgcaP82350 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SgcaP82350 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.7■□□□□ 0.26
SgcaP82350 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SgcaP82350 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.7■□□□□ 0.26
SgcaP82350 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.7■□□□□ 0.26
SgcaP82350 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcaP82350 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.69■□□□□ 0.26
SgcaP82350 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.69■□□□□ 0.26
SgcaP82350 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Gm11687-201ENSMUST00000118911 886 ntBASIC16.69■□□□□ 0.26
SgcaP82350 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.69■□□□□ 0.26
SgcaP82350 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SgcaP82350 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SgcaP82350 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcaP82350 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SgcaP82350 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
SgcaP82350 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SgcaP82350 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.68■□□□□ 0.26
SgcaP82350 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SgcaP82350 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcaP82350 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SgcaP82350 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SgcaP82350 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
SgcaP82350 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SgcaP82350 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.66■□□□□ 0.26
SgcaP82350 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SgcaP82350 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SgcaP82350 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcaP82350 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.65■□□□□ 0.26
SgcaP82350 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcaP82350 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.65■□□□□ 0.26
SgcaP82350 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcaP82350 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SgcaP82350 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SgcaP82350 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.64■□□□□ 0.25
SgcaP82350 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcaP82350 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcaP82350 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcaP82350 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.64■□□□□ 0.25
SgcaP82350 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcaP82350 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SgcaP82350 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SgcaP82350 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcaP82350 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SgcaP82350 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcaP82350 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SgcaP82350 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcaP82350 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcaP82350 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms