Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.97■□□□□ 0.47
Cldn18P56857 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn18P56857 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.97■□□□□ 0.47
Cldn18P56857 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn18P56857 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn18P56857 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn18P56857 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn18P56857 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cldn18P56857 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn18P56857 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn18P56857 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn18P56857 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn18P56857 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cldn18P56857 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn18P56857 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn18P56857 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn18P56857 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.96■□□□□ 0.47
Cldn18P56857 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.96■□□□□ 0.47
Cldn18P56857 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Cldn18P56857 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Cldn18P56857 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
Cldn18P56857 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.95■□□□□ 0.46
Cldn18P56857 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
Cldn18P56857 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Cldn18P56857 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn18P56857 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn18P56857 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cldn18P56857 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn18P56857 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn18P56857 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn18P56857 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.94■□□□□ 0.46
Cldn18P56857 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn18P56857 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn18P56857 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn18P56857 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn18P56857 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cldn18P56857 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn18P56857 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn18P56857 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn18P56857 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.93■□□□□ 0.46
Cldn18P56857 Gm43137-201ENSMUST00000198052 594 ntBASIC17.93■□□□□ 0.46
Cldn18P56857 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn18P56857 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn18P56857 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.93■□□□□ 0.46
Cldn18P56857 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn18P56857 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn18P56857 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cldn18P56857 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.92■□□□□ 0.46
Cldn18P56857 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn18P56857 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn18P56857 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn18P56857 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn18P56857 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Cldn18P56857 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cldn18P56857 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.92■□□□□ 0.46
Cldn18P56857 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn18P56857 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn18P56857 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn18P56857 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn18P56857 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cldn18P56857 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn18P56857 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn18P56857 Gm27454-201ENSMUST00000185090 204 ntBASIC17.91■□□□□ 0.46
Cldn18P56857 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.91■□□□□ 0.46
Cldn18P56857 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn18P56857 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn18P56857 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Cldn18P56857 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn18P56857 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn18P56857 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.9■□□□□ 0.46
Cldn18P56857 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cldn18P56857 Gm12821-201ENSMUST00000120022 600 ntBASIC17.9■□□□□ 0.46
Cldn18P56857 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cldn18P56857 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.9■□□□□ 0.46
Cldn18P56857 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cldn18P56857 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn18P56857 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cldn18P56857 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn18P56857 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cldn18P56857 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cldn18P56857 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn18P56857 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn18P56857 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cldn18P56857 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn18P56857 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.89■□□□□ 0.45
Cldn18P56857 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.89■□□□□ 0.45
Cldn18P56857 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cldn18P56857 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn18P56857 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn18P56857 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn18P56857 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.88■□□□□ 0.45
Cldn18P56857 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms