Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Hmgcs2P54869 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.48■■□□□ 1.19
Hmgcs2P54869 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Hmgcs2P54869 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hmgcs2P54869 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hmgcs2P54869 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hmgcs2P54869 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Hmgcs2P54869 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.47■■□□□ 1.19
Hmgcs2P54869 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.47■■□□□ 1.19
Hmgcs2P54869 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.47■■□□□ 1.19
Hmgcs2P54869 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hmgcs2P54869 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hmgcs2P54869 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hmgcs2P54869 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hmgcs2P54869 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hmgcs2P54869 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hmgcs2P54869 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hmgcs2P54869 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hmgcs2P54869 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Hmgcs2P54869 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.46■■□□□ 1.19
Hmgcs2P54869 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Hmgcs2P54869 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hmgcs2P54869 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Hmgcs2P54869 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hmgcs2P54869 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hmgcs2P54869 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hmgcs2P54869 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hmgcs2P54869 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.44■■□□□ 1.18
Hmgcs2P54869 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.44■■□□□ 1.18
Hmgcs2P54869 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hmgcs2P54869 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hmgcs2P54869 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.43■■□□□ 1.18
Hmgcs2P54869 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Hmgcs2P54869 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.43■■□□□ 1.18
Hmgcs2P54869 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hmgcs2P54869 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hmgcs2P54869 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hmgcs2P54869 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.42■■□□□ 1.18
Hmgcs2P54869 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Gm27011-201ENSMUST00000182352 972 ntBASIC22.42■■□□□ 1.18
Hmgcs2P54869 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmgcs2P54869 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hmgcs2P54869 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.41■■□□□ 1.18
Hmgcs2P54869 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.41■■□□□ 1.18
Hmgcs2P54869 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Hmgcs2P54869 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hmgcs2P54869 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Hmgcs2P54869 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hmgcs2P54869 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hmgcs2P54869 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Hmgcs2P54869 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hmgcs2P54869 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hmgcs2P54869 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.4■■□□□ 1.18
Hmgcs2P54869 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.4■■□□□ 1.18
Hmgcs2P54869 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.4■■□□□ 1.18
Hmgcs2P54869 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.4■■□□□ 1.18
Hmgcs2P54869 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.4■■□□□ 1.18
Hmgcs2P54869 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hmgcs2P54869 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hmgcs2P54869 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hmgcs2P54869 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
Hmgcs2P54869 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.39■■□□□ 1.17
Hmgcs2P54869 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hmgcs2P54869 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Hmgcs2P54869 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Hmgcs2P54869 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmgcs2P54869 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.38■■□□□ 1.17
Hmgcs2P54869 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hmgcs2P54869 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hmgcs2P54869 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hmgcs2P54869 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.37■■□□□ 1.17
Hmgcs2P54869 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hmgcs2P54869 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Hmgcs2P54869 Reep4-203ENSMUST00000226563 1444 ntBASIC22.37■■□□□ 1.17
Hmgcs2P54869 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms