Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Syn1O88935 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syn1O88935 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Syn1O88935 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Syn1O88935 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.75■□□□□ 0.91
Syn1O88935 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Syn1O88935 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syn1O88935 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Syn1O88935 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syn1O88935 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syn1O88935 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syn1O88935 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.74■□□□□ 0.91
Syn1O88935 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syn1O88935 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Syn1O88935 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syn1O88935 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syn1O88935 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syn1O88935 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syn1O88935 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.73■□□□□ 0.91
Syn1O88935 Mir6982-201ENSMUST00000184354 68 ntBASIC20.73■□□□□ 0.91
Syn1O88935 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.73■□□□□ 0.91
Syn1O88935 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.73■□□□□ 0.91
Syn1O88935 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syn1O88935 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syn1O88935 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.73■□□□□ 0.91
Syn1O88935 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syn1O88935 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syn1O88935 Gm13168-201ENSMUST00000121771 632 ntBASIC20.72■□□□□ 0.91
Syn1O88935 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Syn1O88935 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Syn1O88935 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syn1O88935 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syn1O88935 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Syn1O88935 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Syn1O88935 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.71■□□□□ 0.91
Syn1O88935 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.71■□□□□ 0.91
Syn1O88935 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.71■□□□□ 0.91
Syn1O88935 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.71■□□□□ 0.91
Syn1O88935 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syn1O88935 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.7■□□□□ 0.9
Syn1O88935 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Syn1O88935 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Syn1O88935 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.7■□□□□ 0.9
Syn1O88935 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syn1O88935 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Syn1O88935 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syn1O88935 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syn1O88935 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.7■□□□□ 0.9
Syn1O88935 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syn1O88935 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syn1O88935 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syn1O88935 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syn1O88935 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Syn1O88935 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syn1O88935 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.69■□□□□ 0.9
Syn1O88935 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Syn1O88935 Gm10812-201ENSMUST00000099864 546 ntBASIC20.69■□□□□ 0.9
Syn1O88935 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syn1O88935 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.68■□□□□ 0.9
Syn1O88935 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.68■□□□□ 0.9
Syn1O88935 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syn1O88935 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.68■□□□□ 0.9
Syn1O88935 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Syn1O88935 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.67■□□□□ 0.9
Syn1O88935 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syn1O88935 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syn1O88935 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syn1O88935 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.67■□□□□ 0.9
Syn1O88935 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.67■□□□□ 0.9
Syn1O88935 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syn1O88935 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syn1O88935 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Syn1O88935 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Syn1O88935 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syn1O88935 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Syn1O88935 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syn1O88935 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syn1O88935 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syn1O88935 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syn1O88935 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.65■□□□□ 0.9
Syn1O88935 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syn1O88935 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syn1O88935 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.65■□□□□ 0.9
Syn1O88935 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.64■□□□□ 0.9
Syn1O88935 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Syn1O88935 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syn1O88935 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Syn1O88935 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.64■□□□□ 0.89
Syn1O88935 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Syn1O88935 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syn1O88935 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syn1O88935 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms