Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Golph3-205ENSMUST00000228671 2842 ntBASIC19.13■□□□□ 0.65
Hcn3O88705 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hcn3O88705 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.13■□□□□ 0.65
Hcn3O88705 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.13■□□□□ 0.65
Hcn3O88705 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hcn3O88705 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn3O88705 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn3O88705 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn3O88705 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn3O88705 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.12■□□□□ 0.65
Hcn3O88705 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.12■□□□□ 0.65
Hcn3O88705 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn3O88705 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn3O88705 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn3O88705 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcn3O88705 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hcn3O88705 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcn3O88705 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hcn3O88705 Gm5921-201ENSMUST00000075898 882 ntBASIC19.11■□□□□ 0.65
Hcn3O88705 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.11■□□□□ 0.65
Hcn3O88705 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hcn3O88705 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Hcn3O88705 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.1■□□□□ 0.65
Hcn3O88705 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn3O88705 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn3O88705 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hcn3O88705 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.1■□□□□ 0.65
Hcn3O88705 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn3O88705 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn3O88705 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn3O88705 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn3O88705 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn3O88705 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.1■□□□□ 0.65
Hcn3O88705 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Hcn3O88705 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Hcn3O88705 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.09■□□□□ 0.65
Hcn3O88705 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.09■□□□□ 0.65
Hcn3O88705 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Hcn3O88705 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn3O88705 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.08■□□□□ 0.65
Hcn3O88705 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hcn3O88705 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.08■□□□□ 0.65
Hcn3O88705 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hcn3O88705 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn3O88705 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn3O88705 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.08■□□□□ 0.64
Hcn3O88705 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn3O88705 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn3O88705 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn3O88705 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn3O88705 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Hcn3O88705 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.08■□□□□ 0.64
Hcn3O88705 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Hcn3O88705 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn3O88705 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn3O88705 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn3O88705 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.07■□□□□ 0.64
Hcn3O88705 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.07■□□□□ 0.64
Hcn3O88705 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn3O88705 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn3O88705 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn3O88705 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Hcn3O88705 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.06■□□□□ 0.64
Hcn3O88705 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
Hcn3O88705 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn3O88705 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn3O88705 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn3O88705 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn3O88705 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.05■□□□□ 0.64
Hcn3O88705 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.05■□□□□ 0.64
Hcn3O88705 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn3O88705 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn3O88705 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Hcn3O88705 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn3O88705 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.04■□□□□ 0.64
Hcn3O88705 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn3O88705 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn3O88705 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
Hcn3O88705 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn3O88705 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn3O88705 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms