Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube3aO08759 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube3aO08759 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube3aO08759 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.59■■□□□ 1.05
Ube3aO08759 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ube3aO08759 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube3aO08759 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube3aO08759 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube3aO08759 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.58■■□□□ 1.05
Ube3aO08759 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ube3aO08759 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ube3aO08759 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Ube3aO08759 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ube3aO08759 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ube3aO08759 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.57■■□□□ 1.04
Ube3aO08759 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ube3aO08759 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube3aO08759 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube3aO08759 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ube3aO08759 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ube3aO08759 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube3aO08759 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube3aO08759 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube3aO08759 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube3aO08759 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube3aO08759 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube3aO08759 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Ube3aO08759 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ube3aO08759 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.55■■□□□ 1.04
Ube3aO08759 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ube3aO08759 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube3aO08759 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ube3aO08759 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube3aO08759 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.55■■□□□ 1.04
Ube3aO08759 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.55■■□□□ 1.04
Ube3aO08759 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube3aO08759 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ube3aO08759 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ube3aO08759 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube3aO08759 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube3aO08759 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ube3aO08759 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ube3aO08759 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube3aO08759 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ube3aO08759 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube3aO08759 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ube3aO08759 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube3aO08759 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube3aO08759 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.53■■□□□ 1.04
Ube3aO08759 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube3aO08759 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube3aO08759 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ube3aO08759 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube3aO08759 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.53■■□□□ 1.04
Ube3aO08759 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube3aO08759 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube3aO08759 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube3aO08759 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.52■■□□□ 1.04
Ube3aO08759 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube3aO08759 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ube3aO08759 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.51■■□□□ 1.03
Ube3aO08759 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.51■■□□□ 1.03
Ube3aO08759 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ube3aO08759 Gm5812-201ENSMUST00000061073 957 ntBASIC21.51■■□□□ 1.03
Ube3aO08759 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.51■■□□□ 1.03
Ube3aO08759 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube3aO08759 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube3aO08759 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube3aO08759 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube3aO08759 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.5■■□□□ 1.03
Ube3aO08759 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube3aO08759 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ube3aO08759 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.49■■□□□ 1.03
Ube3aO08759 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ube3aO08759 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.49■■□□□ 1.03
Ube3aO08759 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.49■■□□□ 1.03
Ube3aO08759 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ube3aO08759 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube3aO08759 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ube3aO08759 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ube3aO08759 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ube3aO08759 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube3aO08759 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ube3aO08759 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.48■■□□□ 1.03
Ube3aO08759 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube3aO08759 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube3aO08759 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube3aO08759 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube3aO08759 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.48■■□□□ 1.03
Ube3aO08759 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ube3aO08759 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ube3aO08759 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms