Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11bO08712 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.36■□□□□ 0.85
Tnfrsf11bO08712 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.36■□□□□ 0.85
Tnfrsf11bO08712 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.36■□□□□ 0.85
Tnfrsf11bO08712 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11bO08712 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Tnfrsf11bO08712 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11bO08712 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11bO08712 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Tnfrsf11bO08712 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11bO08712 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11bO08712 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11bO08712 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11bO08712 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.35■□□□□ 0.85
Tnfrsf11bO08712 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Tnfrsf11bO08712 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf11bO08712 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf11bO08712 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf11bO08712 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf11bO08712 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf11bO08712 Gm5812-201ENSMUST00000061073 957 ntBASIC20.33■□□□□ 0.85
Tnfrsf11bO08712 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfrsf11bO08712 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfrsf11bO08712 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11bO08712 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tnfrsf11bO08712 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.31■□□□□ 0.84
Tnfrsf11bO08712 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11bO08712 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11bO08712 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11bO08712 Gm9870-201ENSMUST00000063874 645 ntBASIC20.31■□□□□ 0.84
Tnfrsf11bO08712 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11bO08712 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11bO08712 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf11bO08712 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11bO08712 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf11bO08712 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tnfrsf11bO08712 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf11bO08712 Golph3-202ENSMUST00000226517 2359 ntBASIC20.28■□□□□ 0.84
Tnfrsf11bO08712 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf11bO08712 Gm7417-201ENSMUST00000192950 473 ntBASIC20.28■□□□□ 0.84
Tnfrsf11bO08712 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tnfrsf11bO08712 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11bO08712 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11bO08712 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11bO08712 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Tnfrsf11bO08712 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11bO08712 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Tnfrsf11bO08712 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms