Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atf6F6VAN0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atf6F6VAN0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf6F6VAN0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf6F6VAN0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atf6F6VAN0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf6F6VAN0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf6F6VAN0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Atf6F6VAN0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf6F6VAN0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Atf6F6VAN0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf6F6VAN0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf6F6VAN0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Atf6F6VAN0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.55■□□□□ 0.88
Atf6F6VAN0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.55■□□□□ 0.88
Atf6F6VAN0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Atf6F6VAN0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Atf6F6VAN0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf6F6VAN0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf6F6VAN0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.54■□□□□ 0.88
Atf6F6VAN0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf6F6VAN0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf6F6VAN0 Gm43530-201ENSMUST00000195920 274 ntBASIC20.54■□□□□ 0.88
Atf6F6VAN0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atf6F6VAN0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Atf6F6VAN0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf6F6VAN0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf6F6VAN0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Atf6F6VAN0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6F6VAN0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.53■□□□□ 0.88
Atf6F6VAN0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf6F6VAN0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf6F6VAN0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.52■□□□□ 0.88
Atf6F6VAN0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf6F6VAN0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.51■□□□□ 0.87
Atf6F6VAN0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf6F6VAN0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf6F6VAN0 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.49■□□□□ 0.87
Atf6F6VAN0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf6F6VAN0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Atf6F6VAN0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atf6F6VAN0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Atf6F6VAN0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf6F6VAN0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atf6F6VAN0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf6F6VAN0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Atf6F6VAN0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf6F6VAN0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf6F6VAN0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Atf6F6VAN0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf6F6VAN0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atf6F6VAN0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf6F6VAN0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atf6F6VAN0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.48■□□□□ 0.87
Atf6F6VAN0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf6F6VAN0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf6F6VAN0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf6F6VAN0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf6F6VAN0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf6F6VAN0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf6F6VAN0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf6F6VAN0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Atf6F6VAN0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Atf6F6VAN0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Atf6F6VAN0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf6F6VAN0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.46■□□□□ 0.87
Atf6F6VAN0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf6F6VAN0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf6F6VAN0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.46■□□□□ 0.87
Atf6F6VAN0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.46■□□□□ 0.87
Atf6F6VAN0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Atf6F6VAN0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms