Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3543D3Z235 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.02■□□□□ 0.48
Gm3543D3Z235 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3543D3Z235 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3543D3Z235 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3543D3Z235 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
Gm3543D3Z235 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3543D3Z235 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Gm27454-201ENSMUST00000185090 204 ntBASIC18.01■□□□□ 0.47
Gm3543D3Z235 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3543D3Z235 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Gm3543D3Z235 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18■□□□□ 0.47
Gm3543D3Z235 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm3543D3Z235 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3543D3Z235 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.99■□□□□ 0.47
Gm3543D3Z235 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.99■□□□□ 0.47
Gm3543D3Z235 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3543D3Z235 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.98■□□□□ 0.47
Gm3543D3Z235 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3543D3Z235 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.98■□□□□ 0.47
Gm3543D3Z235 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm3543D3Z235 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.97■□□□□ 0.47
Gm3543D3Z235 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3543D3Z235 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3543D3Z235 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Gm3543D3Z235 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3543D3Z235 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3543D3Z235 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.95■□□□□ 0.46
Gm3543D3Z235 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.95■□□□□ 0.46
Gm3543D3Z235 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3543D3Z235 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3543D3Z235 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3543D3Z235 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms