Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Gm45417-201ENSMUST00000209533 758 ntBASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Golgb1-201ENSMUST00000023534 498 ntBASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav13n-4A0A0G2JG01 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-4A0A0G2JG01 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-4A0A0G2JG01 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-4A0A0G2JG01 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-4A0A0G2JG01 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Iqck-206ENSMUST00000208658 2891 ntBASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-4A0A0G2JG01 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13n-4A0A0G2JG01 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms