Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-5A0A075B6B9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-5A0A075B6B9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-5A0A075B6B9 Gm14523-201ENSMUST00000117260 558 ntBASIC16.18■□□□□ 0.18
Trav6d-5A0A075B6B9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.18■□□□□ 0.18
Trav6d-5A0A075B6B9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-5A0A075B6B9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-5A0A075B6B9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-5A0A075B6B9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-5A0A075B6B9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-5A0A075B6B9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trav6d-5A0A075B6B9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-5A0A075B6B9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-5A0A075B6B9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Gm27502-201ENSMUST00000183495 199 ntBASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-5A0A075B6B9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Gm7332-201ENSMUST00000118351 454 ntBASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-5A0A075B6B9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms