Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8-1A0A075B641 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8-1A0A075B641 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Gm45364-201ENSMUST00000210883 159 ntBASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8-1A0A075B641 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8-1A0A075B641 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8-1A0A075B641 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8-1A0A075B641 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Trav8-1A0A075B641 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8-1A0A075B641 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8-1A0A075B641 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8-1A0A075B641 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.27□□□□□ -0.12
Trav8-1A0A075B641 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8-1A0A075B641 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav8-1A0A075B641 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms