Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Atp6v1c1Q9Z1G3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
Atp6v1c1Q9Z1G3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.25■■□□□ 1.63
Atp6v1c1Q9Z1G3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Atp6v1c1Q9Z1G3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Atp6v1c1Q9Z1G3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
Atp6v1c1Q9Z1G3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.24■■□□□ 1.63
Atp6v1c1Q9Z1G3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.24■■□□□ 1.63
Atp6v1c1Q9Z1G3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Atp6v1c1Q9Z1G3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Atp6v1c1Q9Z1G3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Atp6v1c1Q9Z1G3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Atp6v1c1Q9Z1G3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Atp6v1c1Q9Z1G3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Atp6v1c1Q9Z1G3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Atp6v1c1Q9Z1G3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Atp6v1c1Q9Z1G3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Atp6v1c1Q9Z1G3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Atp6v1c1Q9Z1G3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Atp6v1c1Q9Z1G3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Atp6v1c1Q9Z1G3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Atp6v1c1Q9Z1G3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Atp6v1c1Q9Z1G3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Atp6v1c1Q9Z1G3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Atp6v1c1Q9Z1G3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Atp6v1c1Q9Z1G3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Atp6v1c1Q9Z1G3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Atp6v1c1Q9Z1G3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Atp6v1c1Q9Z1G3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Atp6v1c1Q9Z1G3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Atp6v1c1Q9Z1G3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Atp6v1c1Q9Z1G3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Atp6v1c1Q9Z1G3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Atp6v1c1Q9Z1G3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atp6v1c1Q9Z1G3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atp6v1c1Q9Z1G3 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.05■■□□□ 1.6
Atp6v1c1Q9Z1G3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Atp6v1c1Q9Z1G3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Atp6v1c1Q9Z1G3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.03■■□□□ 1.6
Atp6v1c1Q9Z1G3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.96■■□□□ 1.59
Atp6v1c1Q9Z1G3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Atp6v1c1Q9Z1G3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Atp6v1c1Q9Z1G3 Gm25262-201ENSMUST00000174934 133 ntBASIC24.95■■□□□ 1.58
Atp6v1c1Q9Z1G3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.95■■□□□ 1.58
Atp6v1c1Q9Z1G3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.91■■□□□ 1.58
Atp6v1c1Q9Z1G3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atp6v1c1Q9Z1G3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Atp6v1c1Q9Z1G3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atp6v1c1Q9Z1G3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Atp6v1c1Q9Z1G3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Atp6v1c1Q9Z1G3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Atp6v1c1Q9Z1G3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Atp6v1c1Q9Z1G3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Atp6v1c1Q9Z1G3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1c1Q9Z1G3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1c1Q9Z1G3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1c1Q9Z1G3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1c1Q9Z1G3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Atp6v1c1Q9Z1G3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Atp6v1c1Q9Z1G3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Atp6v1c1Q9Z1G3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Atp6v1c1Q9Z1G3 Amer2-203ENSMUST00000225247 2662 ntBASIC24.84■■□□□ 1.57
Atp6v1c1Q9Z1G3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Atp6v1c1Q9Z1G3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Atp6v1c1Q9Z1G3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1c1Q9Z1G3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Atp6v1c1Q9Z1G3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Atp6v1c1Q9Z1G3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1c1Q9Z1G3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1c1Q9Z1G3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Atp6v1c1Q9Z1G3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
Atp6v1c1Q9Z1G3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Atp6v1c1Q9Z1G3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Atp6v1c1Q9Z1G3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Atp6v1c1Q9Z1G3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Atp6v1c1Q9Z1G3 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.74■■□□□ 1.55
Atp6v1c1Q9Z1G3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.74■■□□□ 1.55
Atp6v1c1Q9Z1G3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Atp6v1c1Q9Z1G3 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.73■■□□□ 1.55
Atp6v1c1Q9Z1G3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Atp6v1c1Q9Z1G3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Atp6v1c1Q9Z1G3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Atp6v1c1Q9Z1G3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Atp6v1c1Q9Z1G3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Atp6v1c1Q9Z1G3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Atp6v1c1Q9Z1G3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Atp6v1c1Q9Z1G3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Atp6v1c1Q9Z1G3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Atp6v1c1Q9Z1G3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Atp6v1c1Q9Z1G3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Atp6v1c1Q9Z1G3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Atp6v1c1Q9Z1G3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Atp6v1c1Q9Z1G3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.65■■□□□ 1.54
Atp6v1c1Q9Z1G3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Atp6v1c1Q9Z1G3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Atp6v1c1Q9Z1G3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Atp6v1c1Q9Z1G3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Atp6v1c1Q9Z1G3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
Atp6v1c1Q9Z1G3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Atp6v1c1Q9Z1G3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms