Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chchd1Q9CQA6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chchd1Q9CQA6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chchd1Q9CQA6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chchd1Q9CQA6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chchd1Q9CQA6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chchd1Q9CQA6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chchd1Q9CQA6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chchd1Q9CQA6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Chchd1Q9CQA6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chchd1Q9CQA6 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.68■□□□□ 0.74
Chchd1Q9CQA6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chchd1Q9CQA6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chchd1Q9CQA6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Chchd1Q9CQA6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chchd1Q9CQA6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chchd1Q9CQA6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chchd1Q9CQA6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.62■□□□□ 0.73
Chchd1Q9CQA6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chchd1Q9CQA6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chchd1Q9CQA6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chchd1Q9CQA6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chchd1Q9CQA6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chchd1Q9CQA6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Chchd1Q9CQA6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chchd1Q9CQA6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chchd1Q9CQA6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chchd1Q9CQA6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Chchd1Q9CQA6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chchd1Q9CQA6 Amer2-203ENSMUST00000225247 2662 ntBASIC19.51■□□□□ 0.71
Chchd1Q9CQA6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chchd1Q9CQA6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chchd1Q9CQA6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chchd1Q9CQA6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chchd1Q9CQA6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chchd1Q9CQA6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chchd1Q9CQA6 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.48■□□□□ 0.71
Chchd1Q9CQA6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chchd1Q9CQA6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chchd1Q9CQA6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chchd1Q9CQA6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.45■□□□□ 0.7
Chchd1Q9CQA6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chchd1Q9CQA6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chchd1Q9CQA6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chchd1Q9CQA6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chchd1Q9CQA6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chchd1Q9CQA6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chchd1Q9CQA6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chchd1Q9CQA6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chchd1Q9CQA6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chchd1Q9CQA6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chchd1Q9CQA6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chchd1Q9CQA6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Chchd1Q9CQA6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chchd1Q9CQA6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chchd1Q9CQA6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chchd1Q9CQA6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Chchd1Q9CQA6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chchd1Q9CQA6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chchd1Q9CQA6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Chchd1Q9CQA6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chchd1Q9CQA6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chchd1Q9CQA6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chchd1Q9CQA6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chchd1Q9CQA6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chchd1Q9CQA6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Chchd1Q9CQA6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chchd1Q9CQA6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chchd1Q9CQA6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Chchd1Q9CQA6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chchd1Q9CQA6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.32■□□□□ 0.68
Chchd1Q9CQA6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.31■□□□□ 0.68
Chchd1Q9CQA6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chchd1Q9CQA6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chchd1Q9CQA6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chchd1Q9CQA6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chchd1Q9CQA6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chchd1Q9CQA6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.28■□□□□ 0.68
Chchd1Q9CQA6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chchd1Q9CQA6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chchd1Q9CQA6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chchd1Q9CQA6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chchd1Q9CQA6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chchd1Q9CQA6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Chchd1Q9CQA6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.22■□□□□ 0.67
Chchd1Q9CQA6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chchd1Q9CQA6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chchd1Q9CQA6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.2■□□□□ 0.66
Chchd1Q9CQA6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chchd1Q9CQA6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chchd1Q9CQA6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chchd1Q9CQA6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chchd1Q9CQA6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chchd1Q9CQA6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chchd1Q9CQA6 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.17■□□□□ 0.66
Chchd1Q9CQA6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.17■□□□□ 0.66
Chchd1Q9CQA6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chchd1Q9CQA6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chchd1Q9CQA6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chchd1Q9CQA6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms