Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,27■■■□□ 2,92
Trim34aQ99PP6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC33,27■■■□□ 2,92
Trim34aQ99PP6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC33,21■■■□□ 2,91
Trim34aQ99PP6 Tdp2-203ENSMUST00000223804 1136 ntBASIC33,21■■■□□ 2,91
Trim34aQ99PP6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33,2■■■□□ 2,9
Trim34aQ99PP6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33,19■■■□□ 2,9
Trim34aQ99PP6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC33,18■■■□□ 2,9
Trim34aQ99PP6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC33,16■■■□□ 2,9
Trim34aQ99PP6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC33,16■■■□□ 2,9
Trim34aQ99PP6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC33,15■■■□□ 2,9
Trim34aQ99PP6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC33,14■■■□□ 2,9
Trim34aQ99PP6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC33,13■■■□□ 2,89
Trim34aQ99PP6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC33,11■■■□□ 2,89
Trim34aQ99PP6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC33,09■■■□□ 2,89
Trim34aQ99PP6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,09■■■□□ 2,89
Trim34aQ99PP6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC33,09■■■□□ 2,89
Trim34aQ99PP6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Trim34aQ99PP6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Trim34aQ99PP6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33,05■■■□□ 2,88
Trim34aQ99PP6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC33,04■■■□□ 2,88
Trim34aQ99PP6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC33,01■■■□□ 2,87
Trim34aQ99PP6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32,95■■■□□ 2,87
Trim34aQ99PP6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32,94■■■□□ 2,86
Trim34aQ99PP6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32,93■■■□□ 2,86
Trim34aQ99PP6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32,92■■■□□ 2,86
Trim34aQ99PP6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32,91■■■□□ 2,86
Trim34aQ99PP6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32,9■■■□□ 2,86
Trim34aQ99PP6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32,88■■■□□ 2,85
Trim34aQ99PP6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32,88■■■□□ 2,85
Trim34aQ99PP6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32,87■■■□□ 2,85
Trim34aQ99PP6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32,84■■■□□ 2,85
Trim34aQ99PP6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32,84■■■□□ 2,85
Trim34aQ99PP6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32,83■■■□□ 2,85
Trim34aQ99PP6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32,83■■■□□ 2,85
Trim34aQ99PP6 Gm45855-201ENSMUST00000212546 880 ntBASIC32,83■■■□□ 2,85
Trim34aQ99PP6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32,82■■■□□ 2,84
Trim34aQ99PP6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32,8■■■□□ 2,84
Trim34aQ99PP6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32,75■■■□□ 2,83
Trim34aQ99PP6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32,74■■■□□ 2,83
Trim34aQ99PP6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32,73■■■□□ 2,83
Trim34aQ99PP6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32,72■■■□□ 2,83
Trim34aQ99PP6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32,72■■■□□ 2,83
Trim34aQ99PP6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32,7■■■□□ 2,83
Trim34aQ99PP6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32,68■■■□□ 2,82
Trim34aQ99PP6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32,68■■■□□ 2,82
Trim34aQ99PP6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32,68■■■□□ 2,82
Trim34aQ99PP6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32,67■■■□□ 2,82
Trim34aQ99PP6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32,65■■■□□ 2,82
Trim34aQ99PP6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32,64■■■□□ 2,82
Trim34aQ99PP6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Trim34aQ99PP6 Gm9397-201ENSMUST00000200125 605 ntBASIC32,62■■■□□ 2,81
Trim34aQ99PP6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Trim34aQ99PP6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC32,59■■■□□ 2,81
Trim34aQ99PP6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32,58■■■□□ 2,81
Trim34aQ99PP6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32,55■■■□□ 2,8
Trim34aQ99PP6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32,54■■■□□ 2,8
Trim34aQ99PP6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32,54■■■□□ 2,8
Trim34aQ99PP6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32,53■■■□□ 2,8
Trim34aQ99PP6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32,52■■■□□ 2,8
Trim34aQ99PP6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32,5■■■□□ 2,79
Trim34aQ99PP6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32,5■■■□□ 2,79
Trim34aQ99PP6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32,5■■■□□ 2,79
Trim34aQ99PP6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32,5■■■□□ 2,79
Trim34aQ99PP6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32,47■■■□□ 2,79
Trim34aQ99PP6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32,46■■■□□ 2,79
Trim34aQ99PP6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32,46■■■□□ 2,79
Trim34aQ99PP6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32,45■■■□□ 2,79
Trim34aQ99PP6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32,44■■■□□ 2,78
Trim34aQ99PP6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32,44■■■□□ 2,78
Trim34aQ99PP6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32,42■■■□□ 2,78
Trim34aQ99PP6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32,42■■■□□ 2,78
Trim34aQ99PP6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32,41■■■□□ 2,78
Trim34aQ99PP6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32,41■■■□□ 2,78
Trim34aQ99PP6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32,41■■■□□ 2,78
Trim34aQ99PP6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32,39■■■□□ 2,78
Trim34aQ99PP6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32,38■■■□□ 2,77
Trim34aQ99PP6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32,37■■■□□ 2,77
Trim34aQ99PP6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Trim34aQ99PP6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Trim34aQ99PP6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Trim34aQ99PP6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32,35■■■□□ 2,77
Trim34aQ99PP6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32,33■■■□□ 2,77
Trim34aQ99PP6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32,33■■■□□ 2,77
Trim34aQ99PP6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32,33■■■□□ 2,77
Trim34aQ99PP6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,76
Trim34aQ99PP6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32,32■■■□□ 2,76
Trim34aQ99PP6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32,3■■■□□ 2,76
Trim34aQ99PP6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Trim34aQ99PP6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32,29■■■□□ 2,76
Trim34aQ99PP6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32,24■■■□□ 2,75
Trim34aQ99PP6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32,24■■■□□ 2,75
Trim34aQ99PP6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32,24■■■□□ 2,75
Trim34aQ99PP6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32,23■■■□□ 2,75
Trim34aQ99PP6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32,23■■■□□ 2,75
Trim34aQ99PP6 Gm24970-201ENSMUST00000175582 82 ntBASIC32,23■■■□□ 2,75
Trim34aQ99PP6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32,22■■■□□ 2,75
Trim34aQ99PP6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32,21■■■□□ 2,75
Trim34aQ99PP6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32,2■■■□□ 2,75
Trim34aQ99PP6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32,19■■■□□ 2,74
Trim34aQ99PP6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32,19■■■□□ 2,74
Retrieved 100 of 76,532 protein–RNA pairs in 20,5 ms