Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Rtfdc1Q99K95 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rtfdc1Q99K95 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.07■■■□□ 2.24
Rtfdc1Q99K95 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rtfdc1Q99K95 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.05■■■□□ 2.24
Rtfdc1Q99K95 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rtfdc1Q99K95 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Rtfdc1Q99K95 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rtfdc1Q99K95 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rtfdc1Q99K95 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Rtfdc1Q99K95 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Rtfdc1Q99K95 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Rtfdc1Q99K95 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29■■■□□ 2.23
Rtfdc1Q99K95 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.98■■■□□ 2.23
Rtfdc1Q99K95 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rtfdc1Q99K95 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rtfdc1Q99K95 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rtfdc1Q99K95 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.94■■■□□ 2.22
Rtfdc1Q99K95 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rtfdc1Q99K95 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.92■■■□□ 2.22
Rtfdc1Q99K95 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.87■■■□□ 2.21
Rtfdc1Q99K95 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Rtfdc1Q99K95 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rtfdc1Q99K95 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Rtfdc1Q99K95 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Rtfdc1Q99K95 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Rtfdc1Q99K95 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Rtfdc1Q99K95 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Rtfdc1Q99K95 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.75■■■□□ 2.19
Rtfdc1Q99K95 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rtfdc1Q99K95 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.72■■■□□ 2.19
Rtfdc1Q99K95 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
Rtfdc1Q99K95 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
Rtfdc1Q99K95 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rtfdc1Q99K95 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Rtfdc1Q99K95 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Rtfdc1Q99K95 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rtfdc1Q99K95 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rtfdc1Q99K95 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Rtfdc1Q99K95 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rtfdc1Q99K95 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.63■■■□□ 2.17
Rtfdc1Q99K95 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.62■■■□□ 2.17
Rtfdc1Q99K95 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rtfdc1Q99K95 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rtfdc1Q99K95 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Rtfdc1Q99K95 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Rtfdc1Q99K95 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rtfdc1Q99K95 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.56■■■□□ 2.16
Rtfdc1Q99K95 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.55■■■□□ 2.16
Rtfdc1Q99K95 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.53■■■□□ 2.16
Rtfdc1Q99K95 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rtfdc1Q99K95 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
Rtfdc1Q99K95 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Rtfdc1Q99K95 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rtfdc1Q99K95 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rtfdc1Q99K95 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rtfdc1Q99K95 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Rtfdc1Q99K95 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rtfdc1Q99K95 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rtfdc1Q99K95 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rtfdc1Q99K95 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rtfdc1Q99K95 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.41■■■□□ 2.14
Rtfdc1Q99K95 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Rtfdc1Q99K95 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rtfdc1Q99K95 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.39■■■□□ 2.14
Rtfdc1Q99K95 Gm45855-201ENSMUST00000212546 880 ntBASIC28.39■■■□□ 2.14
Rtfdc1Q99K95 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Rtfdc1Q99K95 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rtfdc1Q99K95 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rtfdc1Q99K95 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtfdc1Q99K95 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtfdc1Q99K95 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Rtfdc1Q99K95 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtfdc1Q99K95 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtfdc1Q99K95 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rtfdc1Q99K95 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rtfdc1Q99K95 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rtfdc1Q99K95 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rtfdc1Q99K95 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rtfdc1Q99K95 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rtfdc1Q99K95 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.28■■■□□ 2.12
Rtfdc1Q99K95 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.27■■■□□ 2.12
Rtfdc1Q99K95 Gm9397-201ENSMUST00000200125 605 ntBASIC28.27■■■□□ 2.12
Rtfdc1Q99K95 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Rtfdc1Q99K95 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
Rtfdc1Q99K95 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtfdc1Q99K95 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rtfdc1Q99K95 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
Rtfdc1Q99K95 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.22■■■□□ 2.11
Rtfdc1Q99K95 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtfdc1Q99K95 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rtfdc1Q99K95 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
Rtfdc1Q99K95 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtfdc1Q99K95 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.19■■■□□ 2.1
Rtfdc1Q99K95 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtfdc1Q99K95 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Rtfdc1Q99K95 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.18■■■□□ 2.1
Rtfdc1Q99K95 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Rtfdc1Q99K95 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rtfdc1Q99K95 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms