Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Col20a1Q923P0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Col20a1Q923P0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Col20a1Q923P0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Col20a1Q923P0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Col20a1Q923P0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Col20a1Q923P0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Col20a1Q923P0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Col20a1Q923P0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.55■■■□□ 2.64
Col20a1Q923P0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Col20a1Q923P0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Col20a1Q923P0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col20a1Q923P0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Col20a1Q923P0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Col20a1Q923P0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Col20a1Q923P0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Col20a1Q923P0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Col20a1Q923P0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Col20a1Q923P0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Col20a1Q923P0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Col20a1Q923P0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.43■■■□□ 2.62
Col20a1Q923P0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Col20a1Q923P0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Col20a1Q923P0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.39■■■□□ 2.62
Col20a1Q923P0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.39■■■□□ 2.62
Col20a1Q923P0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Col20a1Q923P0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
Col20a1Q923P0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Col20a1Q923P0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Col20a1Q923P0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.29■■■□□ 2.6
Col20a1Q923P0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Col20a1Q923P0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Col20a1Q923P0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Col20a1Q923P0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Col20a1Q923P0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Col20a1Q923P0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
Col20a1Q923P0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.21■■■□□ 2.59
Col20a1Q923P0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Col20a1Q923P0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Col20a1Q923P0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Col20a1Q923P0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col20a1Q923P0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col20a1Q923P0 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.14■■■□□ 2.58
Col20a1Q923P0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Col20a1Q923P0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Col20a1Q923P0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Col20a1Q923P0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
Col20a1Q923P0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.1■■■□□ 2.57
Col20a1Q923P0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.07■■■□□ 2.56
Col20a1Q923P0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Col20a1Q923P0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Col20a1Q923P0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Col20a1Q923P0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
Col20a1Q923P0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.01■■■□□ 2.55
Col20a1Q923P0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Col20a1Q923P0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
Col20a1Q923P0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Col20a1Q923P0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Col20a1Q923P0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Col20a1Q923P0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Col20a1Q923P0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.94■■■□□ 2.54
Col20a1Q923P0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Col20a1Q923P0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Col20a1Q923P0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Col20a1Q923P0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Col20a1Q923P0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Col20a1Q923P0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Col20a1Q923P0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Col20a1Q923P0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Col20a1Q923P0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Col20a1Q923P0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.86■■■□□ 2.53
Col20a1Q923P0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Col20a1Q923P0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Col20a1Q923P0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Col20a1Q923P0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Col20a1Q923P0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.8■■■□□ 2.52
Col20a1Q923P0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
Col20a1Q923P0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Col20a1Q923P0 Gm45855-201ENSMUST00000212546 880 ntBASIC30.78■■■□□ 2.52
Col20a1Q923P0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Col20a1Q923P0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Col20a1Q923P0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Col20a1Q923P0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.76■■■□□ 2.52
Col20a1Q923P0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Col20a1Q923P0 Gm9397-201ENSMUST00000200125 605 ntBASIC30.73■■■□□ 2.51
Col20a1Q923P0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Col20a1Q923P0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Col20a1Q923P0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Col20a1Q923P0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Col20a1Q923P0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.71■■■□□ 2.51
Col20a1Q923P0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Col20a1Q923P0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Col20a1Q923P0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
Col20a1Q923P0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Col20a1Q923P0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.67■■■□□ 2.5
Col20a1Q923P0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Col20a1Q923P0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Col20a1Q923P0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Col20a1Q923P0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.64■■■□□ 2.5
Col20a1Q923P0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms