Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhgb2Q91XX7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhgb2Q91XX7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhgb2Q91XX7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhgb2Q91XX7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhgb2Q91XX7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhgb2Q91XX7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhgb2Q91XX7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhgb2Q91XX7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhgb2Q91XX7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgb2Q91XX7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhgb2Q91XX7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgb2Q91XX7 Zxda-201ENSMUST00000117281 2621 ntBASIC24.24■■□□□ 1.47
Pcdhgb2Q91XX7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Pcdhgb2Q91XX7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhgb2Q91XX7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Pcdhgb2Q91XX7 Mipep-204ENSMUST00000225043 1548 ntBASIC24.23■■□□□ 1.47
Pcdhgb2Q91XX7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Pcdhgb2Q91XX7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgb2Q91XX7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgb2Q91XX7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Pcdhgb2Q91XX7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.21■■□□□ 1.47
Pcdhgb2Q91XX7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.2■■□□□ 1.47
Pcdhgb2Q91XX7 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.19■■□□□ 1.46
Pcdhgb2Q91XX7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhgb2Q91XX7 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.19■■□□□ 1.46
Pcdhgb2Q91XX7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Pcdhgb2Q91XX7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhgb2Q91XX7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhgb2Q91XX7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pcdhgb2Q91XX7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhgb2Q91XX7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhgb2Q91XX7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhgb2Q91XX7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhgb2Q91XX7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhgb2Q91XX7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhgb2Q91XX7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhgb2Q91XX7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhgb2Q91XX7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Pcdhgb2Q91XX7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhgb2Q91XX7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhgb2Q91XX7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhgb2Q91XX7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhgb2Q91XX7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.06■■□□□ 1.44
Pcdhgb2Q91XX7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.06■■□□□ 1.44
Pcdhgb2Q91XX7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Pcdhgb2Q91XX7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhgb2Q91XX7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhgb2Q91XX7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhgb2Q91XX7 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.03■■□□□ 1.44
Pcdhgb2Q91XX7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb2Q91XX7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb2Q91XX7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb2Q91XX7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb2Q91XX7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb2Q91XX7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb2Q91XX7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24■■□□□ 1.43
Pcdhgb2Q91XX7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb2Q91XX7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhgb2Q91XX7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgb2Q91XX7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhgb2Q91XX7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhgb2Q91XX7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhgb2Q91XX7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
Pcdhgb2Q91XX7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb2Q91XX7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb2Q91XX7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb2Q91XX7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Pcdhgb2Q91XX7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhgb2Q91XX7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhgb2Q91XX7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb2Q91XX7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb2Q91XX7 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.86■■□□□ 1.41
Pcdhgb2Q91XX7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhgb2Q91XX7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdhgb2Q91XX7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.4
Pcdhgb2Q91XX7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb2Q91XX7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb2Q91XX7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb2Q91XX7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb2Q91XX7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhgb2Q91XX7 Gm25262-201ENSMUST00000174934 133 ntBASIC23.76■■□□□ 1.39
Pcdhgb2Q91XX7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhgb2Q91XX7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdhgb2Q91XX7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhgb2Q91XX7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhgb2Q91XX7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhgb2Q91XX7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhgb2Q91XX7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhgb2Q91XX7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhgb2Q91XX7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhgb2Q91XX7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
Pcdhgb2Q91XX7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb2Q91XX7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhgb2Q91XX7 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.67■■□□□ 1.38
Pcdhgb2Q91XX7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhgb2Q91XX7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhgb2Q91XX7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhgb2Q91XX7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.64■■□□□ 1.37
Pcdhgb2Q91XX7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms