Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
Trex1Q91XB0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Trex1Q91XB0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Trex1Q91XB0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Trex1Q91XB0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Trex1Q91XB0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
Trex1Q91XB0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
Trex1Q91XB0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trex1Q91XB0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Trex1Q91XB0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Trex1Q91XB0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trex1Q91XB0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trex1Q91XB0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.78■■■□□ 2.52
Trex1Q91XB0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Trex1Q91XB0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Trex1Q91XB0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Trex1Q91XB0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Trex1Q91XB0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Trex1Q91XB0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Trex1Q91XB0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.72■■■□□ 2.51
Trex1Q91XB0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Trex1Q91XB0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Trex1Q91XB0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.69■■■□□ 2.5
Trex1Q91XB0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.69■■■□□ 2.5
Trex1Q91XB0 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.67■■■□□ 2.5
Trex1Q91XB0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Trex1Q91XB0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Trex1Q91XB0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.63■■■□□ 2.49
Trex1Q91XB0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Trex1Q91XB0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.62■■■□□ 2.49
Trex1Q91XB0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Trex1Q91XB0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Trex1Q91XB0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Trex1Q91XB0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Trex1Q91XB0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Trex1Q91XB0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Trex1Q91XB0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Trex1Q91XB0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Trex1Q91XB0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Trex1Q91XB0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
Trex1Q91XB0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.47■■■□□ 2.47
Trex1Q91XB0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Trex1Q91XB0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.4■■■□□ 2.46
Trex1Q91XB0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Trex1Q91XB0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.39■■■□□ 2.46
Trex1Q91XB0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.45
Trex1Q91XB0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Trex1Q91XB0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Trex1Q91XB0 Gm45855-201ENSMUST00000212546 880 ntBASIC30.37■■■□□ 2.45
Trex1Q91XB0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Trex1Q91XB0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trex1Q91XB0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trex1Q91XB0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trex1Q91XB0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Trex1Q91XB0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Trex1Q91XB0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Trex1Q91XB0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Trex1Q91XB0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Trex1Q91XB0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
Trex1Q91XB0 Gm9397-201ENSMUST00000200125 605 ntBASIC30.23■■■□□ 2.43
Trex1Q91XB0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Trex1Q91XB0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.22■■■□□ 2.43
Trex1Q91XB0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trex1Q91XB0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trex1Q91XB0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.21■■■□□ 2.43
Trex1Q91XB0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
Trex1Q91XB0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trex1Q91XB0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trex1Q91XB0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.18■■■□□ 2.42
Trex1Q91XB0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trex1Q91XB0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.16■■■□□ 2.42
Trex1Q91XB0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.15■■■□□ 2.42
Trex1Q91XB0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Trex1Q91XB0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.14■■■□□ 2.42
Trex1Q91XB0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trex1Q91XB0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trex1Q91XB0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
Trex1Q91XB0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Trex1Q91XB0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.11■■■□□ 2.41
Trex1Q91XB0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trex1Q91XB0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trex1Q91XB0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trex1Q91XB0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trex1Q91XB0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trex1Q91XB0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.08■■■□□ 2.41
Trex1Q91XB0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trex1Q91XB0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trex1Q91XB0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Trex1Q91XB0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
Trex1Q91XB0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Trex1Q91XB0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.98■■■□□ 2.39
Trex1Q91XB0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.98■■■□□ 2.39
Trex1Q91XB0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trex1Q91XB0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trex1Q91XB0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Trex1Q91XB0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trex1Q91XB0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
Trex1Q91XB0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Trex1Q91XB0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Trex1Q91XB0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms