Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.85■■□□□ 1.73
Cdhr1Q8VHP6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cdhr1Q8VHP6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cdhr1Q8VHP6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
Cdhr1Q8VHP6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cdhr1Q8VHP6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cdhr1Q8VHP6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cdhr1Q8VHP6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Cdhr1Q8VHP6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cdhr1Q8VHP6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cdhr1Q8VHP6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cdhr1Q8VHP6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
Cdhr1Q8VHP6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Cdhr1Q8VHP6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Cdhr1Q8VHP6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cdhr1Q8VHP6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.71■■□□□ 1.71
Cdhr1Q8VHP6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Cdhr1Q8VHP6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.68■■□□□ 1.7
Cdhr1Q8VHP6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Cdhr1Q8VHP6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Cdhr1Q8VHP6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Cdhr1Q8VHP6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cdhr1Q8VHP6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cdhr1Q8VHP6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cdhr1Q8VHP6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cdhr1Q8VHP6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Cdhr1Q8VHP6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cdhr1Q8VHP6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.59■■□□□ 1.69
Cdhr1Q8VHP6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.59■■□□□ 1.69
Cdhr1Q8VHP6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cdhr1Q8VHP6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cdhr1Q8VHP6 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.55■■□□□ 1.68
Cdhr1Q8VHP6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cdhr1Q8VHP6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.52■■□□□ 1.68
Cdhr1Q8VHP6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.52■■□□□ 1.68
Cdhr1Q8VHP6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdhr1Q8VHP6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdhr1Q8VHP6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Cdhr1Q8VHP6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cdhr1Q8VHP6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Cdhr1Q8VHP6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Cdhr1Q8VHP6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Cdhr1Q8VHP6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cdhr1Q8VHP6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cdhr1Q8VHP6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Cdhr1Q8VHP6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cdhr1Q8VHP6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.38■■□□□ 1.65
Cdhr1Q8VHP6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cdhr1Q8VHP6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cdhr1Q8VHP6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cdhr1Q8VHP6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cdhr1Q8VHP6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cdhr1Q8VHP6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cdhr1Q8VHP6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cdhr1Q8VHP6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cdhr1Q8VHP6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.33■■□□□ 1.65
Cdhr1Q8VHP6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdhr1Q8VHP6 Gm45855-201ENSMUST00000212546 880 ntBASIC25.32■■□□□ 1.64
Cdhr1Q8VHP6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdhr1Q8VHP6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cdhr1Q8VHP6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Cdhr1Q8VHP6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cdhr1Q8VHP6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cdhr1Q8VHP6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.3■■□□□ 1.64
Cdhr1Q8VHP6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
Cdhr1Q8VHP6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.26■■□□□ 1.63
Cdhr1Q8VHP6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.26■■□□□ 1.63
Cdhr1Q8VHP6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cdhr1Q8VHP6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cdhr1Q8VHP6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cdhr1Q8VHP6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cdhr1Q8VHP6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
Cdhr1Q8VHP6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdhr1Q8VHP6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdhr1Q8VHP6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Cdhr1Q8VHP6 Gm9397-201ENSMUST00000200125 605 ntBASIC25.19■■□□□ 1.62
Cdhr1Q8VHP6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdhr1Q8VHP6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cdhr1Q8VHP6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cdhr1Q8VHP6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cdhr1Q8VHP6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cdhr1Q8VHP6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Cdhr1Q8VHP6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
Cdhr1Q8VHP6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.15■■□□□ 1.62
Cdhr1Q8VHP6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cdhr1Q8VHP6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cdhr1Q8VHP6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cdhr1Q8VHP6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.12■■□□□ 1.61
Cdhr1Q8VHP6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cdhr1Q8VHP6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.12■■□□□ 1.61
Cdhr1Q8VHP6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cdhr1Q8VHP6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cdhr1Q8VHP6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cdhr1Q8VHP6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.09■■□□□ 1.61
Cdhr1Q8VHP6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.09■■□□□ 1.61
Cdhr1Q8VHP6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Cdhr1Q8VHP6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Cdhr1Q8VHP6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.08■■□□□ 1.61
Cdhr1Q8VHP6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.6
Cdhr1Q8VHP6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms