Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Atp2a1Q8R429 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
Atp2a1Q8R429 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Atp2a1Q8R429 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.58■■■□□ 2.33
Atp2a1Q8R429 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.55■■■□□ 2.32
Atp2a1Q8R429 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Atp2a1Q8R429 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Atp2a1Q8R429 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Atp2a1Q8R429 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Atp2a1Q8R429 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Atp2a1Q8R429 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Atp2a1Q8R429 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Atp2a1Q8R429 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Atp2a1Q8R429 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Atp2a1Q8R429 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Atp2a1Q8R429 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Atp2a1Q8R429 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Atp2a1Q8R429 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Atp2a1Q8R429 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
Atp2a1Q8R429 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Atp2a1Q8R429 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Atp2a1Q8R429 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.37■■■□□ 2.29
Atp2a1Q8R429 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Atp2a1Q8R429 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.37■■■□□ 2.29
Atp2a1Q8R429 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Atp2a1Q8R429 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Atp2a1Q8R429 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Atp2a1Q8R429 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Atp2a1Q8R429 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Atp2a1Q8R429 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
Atp2a1Q8R429 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.28■■■□□ 2.28
Atp2a1Q8R429 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Atp2a1Q8R429 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.27■■■□□ 2.28
Atp2a1Q8R429 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Atp2a1Q8R429 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.26■■■□□ 2.27
Atp2a1Q8R429 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Atp2a1Q8R429 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Atp2a1Q8R429 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.19■■■□□ 2.26
Atp2a1Q8R429 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.18■■■□□ 2.26
Atp2a1Q8R429 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.15■■■□□ 2.26
Atp2a1Q8R429 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Atp2a1Q8R429 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Atp2a1Q8R429 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Atp2a1Q8R429 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Atp2a1Q8R429 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Atp2a1Q8R429 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Atp2a1Q8R429 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Atp2a1Q8R429 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Atp2a1Q8R429 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
Atp2a1Q8R429 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.01■■■□□ 2.23
Atp2a1Q8R429 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Atp2a1Q8R429 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Atp2a1Q8R429 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Atp2a1Q8R429 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
Atp2a1Q8R429 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Atp2a1Q8R429 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Atp2a1Q8R429 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Atp2a1Q8R429 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.96■■■□□ 2.23
Atp2a1Q8R429 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.96■■■□□ 2.23
Atp2a1Q8R429 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.94■■■□□ 2.22
Atp2a1Q8R429 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
Atp2a1Q8R429 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Atp2a1Q8R429 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
Atp2a1Q8R429 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Atp2a1Q8R429 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Atp2a1Q8R429 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Atp2a1Q8R429 Gm45855-201ENSMUST00000212546 880 ntBASIC28.91■■■□□ 2.22
Atp2a1Q8R429 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Atp2a1Q8R429 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Atp2a1Q8R429 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Atp2a1Q8R429 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Atp2a1Q8R429 Gm9397-201ENSMUST00000200125 605 ntBASIC28.86■■■□□ 2.21
Atp2a1Q8R429 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
Atp2a1Q8R429 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.85■■■□□ 2.21
Atp2a1Q8R429 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Atp2a1Q8R429 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Atp2a1Q8R429 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Atp2a1Q8R429 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Atp2a1Q8R429 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Atp2a1Q8R429 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Atp2a1Q8R429 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Atp2a1Q8R429 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Atp2a1Q8R429 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Atp2a1Q8R429 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.78■■■□□ 2.2
Atp2a1Q8R429 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Atp2a1Q8R429 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.77■■■□□ 2.2
Atp2a1Q8R429 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.76■■■□□ 2.2
Atp2a1Q8R429 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Atp2a1Q8R429 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Atp2a1Q8R429 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.74■■■□□ 2.19
Atp2a1Q8R429 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.72■■■□□ 2.19
Atp2a1Q8R429 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.71■■■□□ 2.19
Atp2a1Q8R429 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Atp2a1Q8R429 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Atp2a1Q8R429 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.68■■■□□ 2.18
Atp2a1Q8R429 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
Atp2a1Q8R429 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Atp2a1Q8R429 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Atp2a1Q8R429 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.66■■■□□ 2.18
Atp2a1Q8R429 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms