Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm5987-201ENSMUST00000196433 1151 ntBASIC33.85■■■■□ 3.01
Col23a1Q8K4G2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC33.8■■■■□ 3
Col23a1Q8K4G2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC33.79■■■■□ 3
Col23a1Q8K4G2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.77■■■■□ 3
Col23a1Q8K4G2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC33.77■■■■□ 3
Col23a1Q8K4G2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Col23a1Q8K4G2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Col23a1Q8K4G2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC33.73■■■□□ 2.99
Col23a1Q8K4G2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Col23a1Q8K4G2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Col23a1Q8K4G2 Gm9397-201ENSMUST00000200125 605 ntBASIC33.7■■■□□ 2.99
Col23a1Q8K4G2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.69■■■□□ 2.98
Col23a1Q8K4G2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Col23a1Q8K4G2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC33.68■■■□□ 2.98
Col23a1Q8K4G2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Col23a1Q8K4G2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Col23a1Q8K4G2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Col23a1Q8K4G2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.66■■■□□ 2.98
Col23a1Q8K4G2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Col23a1Q8K4G2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Col23a1Q8K4G2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Col23a1Q8K4G2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC33.62■■■□□ 2.97
Col23a1Q8K4G2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Col23a1Q8K4G2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Col23a1Q8K4G2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Col23a1Q8K4G2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC33.6■■■□□ 2.97
Col23a1Q8K4G2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
Col23a1Q8K4G2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Col23a1Q8K4G2 Zfp131-207ENSMUST00000224946 1783 ntBASIC33.55■■■□□ 2.96
Col23a1Q8K4G2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC33.54■■■□□ 2.96
Col23a1Q8K4G2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Col23a1Q8K4G2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC33.53■■■□□ 2.96
Col23a1Q8K4G2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Col23a1Q8K4G2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Col23a1Q8K4G2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC33.51■■■□□ 2.95
Col23a1Q8K4G2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC33.5■■■□□ 2.95
Col23a1Q8K4G2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC33.48■■■□□ 2.95
Col23a1Q8K4G2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
Col23a1Q8K4G2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Col23a1Q8K4G2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Col23a1Q8K4G2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC33.43■■■□□ 2.94
Col23a1Q8K4G2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Col23a1Q8K4G2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC33.42■■■□□ 2.94
Col23a1Q8K4G2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Col23a1Q8K4G2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Col23a1Q8K4G2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC33.38■■■□□ 2.93
Col23a1Q8K4G2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC33.37■■■□□ 2.93
Col23a1Q8K4G2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC33.34■■■□□ 2.93
Col23a1Q8K4G2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Col23a1Q8K4G2 Mipep-204ENSMUST00000225043 1548 ntBASIC33.31■■■□□ 2.92
Col23a1Q8K4G2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC33.3■■■□□ 2.92
Col23a1Q8K4G2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Col23a1Q8K4G2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Col23a1Q8K4G2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Col23a1Q8K4G2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Col23a1Q8K4G2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC33.24■■■□□ 2.91
Col23a1Q8K4G2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
Col23a1Q8K4G2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9
Col23a1Q8K4G2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC33.15■■■□□ 2.9
Col23a1Q8K4G2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Col23a1Q8K4G2 Gm24970-201ENSMUST00000175582 82 ntBASIC33.1■■■□□ 2.89
Col23a1Q8K4G2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC33.1■■■□□ 2.89
Col23a1Q8K4G2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Col23a1Q8K4G2 Gm9939-201ENSMUST00000067161 1154 ntBASIC33.08■■■□□ 2.89
Col23a1Q8K4G2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
Col23a1Q8K4G2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Col23a1Q8K4G2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Col23a1Q8K4G2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Col23a1Q8K4G2 Gm8503-201ENSMUST00000118131 455 ntBASIC33■■■□□ 2.87
Col23a1Q8K4G2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC33■■■□□ 2.87
Col23a1Q8K4G2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.99■■■□□ 2.87
Col23a1Q8K4G2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Col23a1Q8K4G2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Col23a1Q8K4G2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Col23a1Q8K4G2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.89■■■□□ 2.86
Col23a1Q8K4G2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Col23a1Q8K4G2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.88■■■□□ 2.85
Col23a1Q8K4G2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Col23a1Q8K4G2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Col23a1Q8K4G2 Gm6821-201ENSMUST00000107540 542 ntBASIC32.78■■■□□ 2.84
Col23a1Q8K4G2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.77■■■□□ 2.84
Col23a1Q8K4G2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.76■■■□□ 2.83
Col23a1Q8K4G2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Col23a1Q8K4G2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Col23a1Q8K4G2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Col23a1Q8K4G2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.7■■■□□ 2.83
Col23a1Q8K4G2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Col23a1Q8K4G2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Col23a1Q8K4G2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
Col23a1Q8K4G2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col23a1Q8K4G2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Col23a1Q8K4G2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
Col23a1Q8K4G2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Col23a1Q8K4G2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Col23a1Q8K4G2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Col23a1Q8K4G2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.55■■■□□ 2.8
Col23a1Q8K4G2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Col23a1Q8K4G2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC32.51■■■□□ 2.8
Col23a1Q8K4G2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Col23a1Q8K4G2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms