Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
Cystm1Q8K353 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cystm1Q8K353 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cystm1Q8K353 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.19■□□□□ 0.18
Cystm1Q8K353 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cystm1Q8K353 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cystm1Q8K353 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cystm1Q8K353 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cystm1Q8K353 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cystm1Q8K353 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cystm1Q8K353 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cystm1Q8K353 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cystm1Q8K353 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.15■□□□□ 0.18
Cystm1Q8K353 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cystm1Q8K353 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cystm1Q8K353 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cystm1Q8K353 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cystm1Q8K353 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cystm1Q8K353 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cystm1Q8K353 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cystm1Q8K353 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cystm1Q8K353 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cystm1Q8K353 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cystm1Q8K353 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cystm1Q8K353 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cystm1Q8K353 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.08■□□□□ 0.16
Cystm1Q8K353 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cystm1Q8K353 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cystm1Q8K353 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Cystm1Q8K353 Amer2-203ENSMUST00000225247 2662 ntBASIC16.04■□□□□ 0.16
Cystm1Q8K353 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.04■□□□□ 0.16
Cystm1Q8K353 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cystm1Q8K353 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.03■□□□□ 0.16
Cystm1Q8K353 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cystm1Q8K353 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cystm1Q8K353 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cystm1Q8K353 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cystm1Q8K353 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cystm1Q8K353 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cystm1Q8K353 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cystm1Q8K353 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC16.02■□□□□ 0.15
Cystm1Q8K353 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cystm1Q8K353 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cystm1Q8K353 Gm43445-201ENSMUST00000198564 2091 ntBASIC15.99■□□□□ 0.15
Cystm1Q8K353 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cystm1Q8K353 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cystm1Q8K353 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cystm1Q8K353 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cystm1Q8K353 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC15.96■□□□□ 0.15
Cystm1Q8K353 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.96■□□□□ 0.15
Cystm1Q8K353 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cystm1Q8K353 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cystm1Q8K353 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cystm1Q8K353 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cystm1Q8K353 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cystm1Q8K353 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cystm1Q8K353 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cystm1Q8K353 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cystm1Q8K353 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cystm1Q8K353 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cystm1Q8K353 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cystm1Q8K353 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cystm1Q8K353 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cystm1Q8K353 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cystm1Q8K353 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cystm1Q8K353 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cystm1Q8K353 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cystm1Q8K353 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cystm1Q8K353 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cystm1Q8K353 Gm26115-201ENSMUST00000175605 87 ntBASIC15.9■□□□□ 0.14
Cystm1Q8K353 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cystm1Q8K353 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cystm1Q8K353 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cystm1Q8K353 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cystm1Q8K353 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cystm1Q8K353 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cystm1Q8K353 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cystm1Q8K353 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cystm1Q8K353 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cystm1Q8K353 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cystm1Q8K353 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cystm1Q8K353 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.86■□□□□ 0.13
Cystm1Q8K353 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cystm1Q8K353 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cystm1Q8K353 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cystm1Q8K353 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15.85■□□□□ 0.13
Cystm1Q8K353 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cystm1Q8K353 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cystm1Q8K353 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cystm1Q8K353 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cystm1Q8K353 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cystm1Q8K353 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cystm1Q8K353 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cystm1Q8K353 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cystm1Q8K353 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.82■□□□□ 0.12
Cystm1Q8K353 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cystm1Q8K353 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cystm1Q8K353 Fezf2-202ENSMUST00000224023 1917 ntBASIC15.8■□□□□ 0.12
Cystm1Q8K353 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cystm1Q8K353 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms