Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Mmp28Q8CGV8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp28Q8CGV8 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.94■■□□□ 1.1
Mmp28Q8CGV8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Mmp28Q8CGV8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Mmp28Q8CGV8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Mmp28Q8CGV8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Mmp28Q8CGV8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mmp28Q8CGV8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mmp28Q8CGV8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp28Q8CGV8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mmp28Q8CGV8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mmp28Q8CGV8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mmp28Q8CGV8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mmp28Q8CGV8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.82■■□□□ 1.08
Mmp28Q8CGV8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Mmp28Q8CGV8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Mmp28Q8CGV8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Mmp28Q8CGV8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Mmp28Q8CGV8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.79■■□□□ 1.08
Mmp28Q8CGV8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mmp28Q8CGV8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mmp28Q8CGV8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp28Q8CGV8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp28Q8CGV8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp28Q8CGV8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp28Q8CGV8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp28Q8CGV8 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.72■■□□□ 1.07
Mmp28Q8CGV8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp28Q8CGV8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp28Q8CGV8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Mmp28Q8CGV8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp28Q8CGV8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp28Q8CGV8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Mmp28Q8CGV8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Mmp28Q8CGV8 Rab21-202ENSMUST00000218831 843 ntBASIC21.7■■□□□ 1.06
Mmp28Q8CGV8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp28Q8CGV8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Mmp28Q8CGV8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp28Q8CGV8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Mmp28Q8CGV8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp28Q8CGV8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp28Q8CGV8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp28Q8CGV8 Amer2-203ENSMUST00000225247 2662 ntBASIC21.65■■□□□ 1.06
Mmp28Q8CGV8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp28Q8CGV8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mmp28Q8CGV8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mmp28Q8CGV8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mmp28Q8CGV8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mmp28Q8CGV8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mmp28Q8CGV8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Mmp28Q8CGV8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.58■■□□□ 1.05
Mmp28Q8CGV8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.57■■□□□ 1.04
Mmp28Q8CGV8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mmp28Q8CGV8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.56■■□□□ 1.04
Mmp28Q8CGV8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mmp28Q8CGV8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.56■■□□□ 1.04
Mmp28Q8CGV8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.55■■□□□ 1.04
Mmp28Q8CGV8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Mmp28Q8CGV8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mmp28Q8CGV8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mmp28Q8CGV8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Mmp28Q8CGV8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp28Q8CGV8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp28Q8CGV8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp28Q8CGV8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp28Q8CGV8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp28Q8CGV8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp28Q8CGV8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp28Q8CGV8 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.49■■□□□ 1.03
Mmp28Q8CGV8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp28Q8CGV8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp28Q8CGV8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Mmp28Q8CGV8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp28Q8CGV8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp28Q8CGV8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp28Q8CGV8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp28Q8CGV8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp28Q8CGV8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Mmp28Q8CGV8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.41■■□□□ 1.02
Mmp28Q8CGV8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp28Q8CGV8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp28Q8CGV8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp28Q8CGV8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp28Q8CGV8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Mmp28Q8CGV8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp28Q8CGV8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp28Q8CGV8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp28Q8CGV8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Mmp28Q8CGV8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms