Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist3h2bbQ8CGP0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist3h2bbQ8CGP0 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.03■□□□□ 0.8
Hist3h2bbQ8CGP0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hist3h2bbQ8CGP0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hist3h2bbQ8CGP0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Hist3h2bbQ8CGP0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist3h2bbQ8CGP0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist3h2bbQ8CGP0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist3h2bbQ8CGP0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist3h2bbQ8CGP0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist3h2bbQ8CGP0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hist3h2bbQ8CGP0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hist3h2bbQ8CGP0 Amer2-203ENSMUST00000225247 2662 ntBASIC19.94■□□□□ 0.78
Hist3h2bbQ8CGP0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist3h2bbQ8CGP0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hist3h2bbQ8CGP0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hist3h2bbQ8CGP0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.91■□□□□ 0.78
Hist3h2bbQ8CGP0 Gm15045-201ENSMUST00000117359 883 ntBASIC19.91■□□□□ 0.78
Hist3h2bbQ8CGP0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hist3h2bbQ8CGP0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.9■□□□□ 0.78
Hist3h2bbQ8CGP0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hist3h2bbQ8CGP0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hist3h2bbQ8CGP0 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.88■□□□□ 0.77
Hist3h2bbQ8CGP0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist3h2bbQ8CGP0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hist3h2bbQ8CGP0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hist3h2bbQ8CGP0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hist3h2bbQ8CGP0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hist3h2bbQ8CGP0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist3h2bbQ8CGP0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hist3h2bbQ8CGP0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hist3h2bbQ8CGP0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hist3h2bbQ8CGP0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hist3h2bbQ8CGP0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist3h2bbQ8CGP0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist3h2bbQ8CGP0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist3h2bbQ8CGP0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hist3h2bbQ8CGP0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.8■□□□□ 0.76
Hist3h2bbQ8CGP0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hist3h2bbQ8CGP0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hist3h2bbQ8CGP0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hist3h2bbQ8CGP0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Hist3h2bbQ8CGP0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hist3h2bbQ8CGP0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hist3h2bbQ8CGP0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.75■□□□□ 0.75
Hist3h2bbQ8CGP0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hist3h2bbQ8CGP0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hist3h2bbQ8CGP0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hist3h2bbQ8CGP0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hist3h2bbQ8CGP0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hist3h2bbQ8CGP0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hist3h2bbQ8CGP0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hist3h2bbQ8CGP0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Hist3h2bbQ8CGP0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hist3h2bbQ8CGP0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hist3h2bbQ8CGP0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hist3h2bbQ8CGP0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hist3h2bbQ8CGP0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hist3h2bbQ8CGP0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hist3h2bbQ8CGP0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hist3h2bbQ8CGP0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hist3h2bbQ8CGP0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hist3h2bbQ8CGP0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hist3h2bbQ8CGP0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hist3h2bbQ8CGP0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hist3h2bbQ8CGP0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hist3h2bbQ8CGP0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hist3h2bbQ8CGP0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist3h2bbQ8CGP0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist3h2bbQ8CGP0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hist3h2bbQ8CGP0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hist3h2bbQ8CGP0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Hist3h2bbQ8CGP0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Hist3h2bbQ8CGP0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist3h2bbQ8CGP0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist3h2bbQ8CGP0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist3h2bbQ8CGP0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist3h2bbQ8CGP0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.56■□□□□ 0.72
Hist3h2bbQ8CGP0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hist3h2bbQ8CGP0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hist3h2bbQ8CGP0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hist3h2bbQ8CGP0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist3h2bbQ8CGP0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist3h2bbQ8CGP0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hist3h2bbQ8CGP0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist3h2bbQ8CGP0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist3h2bbQ8CGP0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist3h2bbQ8CGP0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist3h2bbQ8CGP0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hist3h2bbQ8CGP0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hist3h2bbQ8CGP0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hist3h2bbQ8CGP0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist3h2bbQ8CGP0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hist3h2bbQ8CGP0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist3h2bbQ8CGP0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist3h2bbQ8CGP0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Hist3h2bbQ8CGP0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist3h2bbQ8CGP0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
Hist3h2bbQ8CGP0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms