Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC44.13■■■■■ 4.65
Pabpn1Q8CCS6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC44.12■■■■■ 4.65
Pabpn1Q8CCS6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC44.11■■■■■ 4.65
Pabpn1Q8CCS6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC44.08■■■■■ 4.65
Pabpn1Q8CCS6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC44.06■■■■■ 4.64
Pabpn1Q8CCS6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC44.02■■■■■ 4.64
Pabpn1Q8CCS6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC44■■■■■ 4.63
Pabpn1Q8CCS6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC43.89■■■■■ 4.62
Pabpn1Q8CCS6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC43.89■■■■■ 4.62
Pabpn1Q8CCS6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC43.88■■■■■ 4.62
Pabpn1Q8CCS6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC43.84■■■■■ 4.61
Pabpn1Q8CCS6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC43.83■■■■■ 4.61
Pabpn1Q8CCS6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC43.81■■■■■ 4.6
Pabpn1Q8CCS6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC43.8■■■■■ 4.6
Pabpn1Q8CCS6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC43.76■■■■■ 4.6
Pabpn1Q8CCS6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC43.73■■■■■ 4.59
Pabpn1Q8CCS6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC43.72■■■■■ 4.59
Pabpn1Q8CCS6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC43.71■■■■■ 4.59
Pabpn1Q8CCS6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC43.71■■■■■ 4.59
Pabpn1Q8CCS6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC43.7■■■■■ 4.59
Pabpn1Q8CCS6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC43.69■■■■■ 4.59
Pabpn1Q8CCS6 Gm8503-201ENSMUST00000118131 455 ntBASIC43.64■■■■■ 4.58
Pabpn1Q8CCS6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC43.6■■■■■ 4.57
Pabpn1Q8CCS6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC43.6■■■■■ 4.57
Pabpn1Q8CCS6 Gm9939-201ENSMUST00000067161 1154 ntBASIC43.6■■■■■ 4.57
Pabpn1Q8CCS6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Pabpn1Q8CCS6 Gm42596-201ENSMUST00000196305 1958 ntBASIC43.49■■■■■ 4.55
Pabpn1Q8CCS6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC43.47■■■■■ 4.55
Pabpn1Q8CCS6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC43.46■■■■■ 4.55
Pabpn1Q8CCS6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC43.45■■■■■ 4.55
Pabpn1Q8CCS6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC43.44■■■■■ 4.54
Pabpn1Q8CCS6 Gm10524-201ENSMUST00000181931 1893 ntBASIC43.42■■■■■ 4.54
Pabpn1Q8CCS6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC43.38■■■■■ 4.53
Pabpn1Q8CCS6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC43.36■■■■■ 4.53
Pabpn1Q8CCS6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC43.36■■■■■ 4.53
Pabpn1Q8CCS6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC43.34■■■■■ 4.53
Pabpn1Q8CCS6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC43.32■■■■■ 4.53
Pabpn1Q8CCS6 Gm24970-201ENSMUST00000175582 82 ntBASIC43.3■■■■■ 4.52
Pabpn1Q8CCS6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC43.28■■■■■ 4.52
Pabpn1Q8CCS6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC43.25■■■■■ 4.51
Pabpn1Q8CCS6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC43.23■■■■■ 4.51
Pabpn1Q8CCS6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC43.23■■■■■ 4.51
Pabpn1Q8CCS6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC43.22■■■■■ 4.51
Pabpn1Q8CCS6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC43.22■■■■■ 4.51
Pabpn1Q8CCS6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC43.19■■■■■ 4.5
Pabpn1Q8CCS6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC43.19■■■■■ 4.5
Pabpn1Q8CCS6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC43.18■■■■■ 4.5
Pabpn1Q8CCS6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC43.16■■■■■ 4.5
Pabpn1Q8CCS6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC43.16■■■■■ 4.5
Pabpn1Q8CCS6 Gm6821-201ENSMUST00000107540 542 ntBASIC43.16■■■■■ 4.5
Pabpn1Q8CCS6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC43.15■■■■■ 4.5
Pabpn1Q8CCS6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC43.06■■■■■ 4.48
Pabpn1Q8CCS6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC43.01■■■■■ 4.48
Pabpn1Q8CCS6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC42.98■■■■■ 4.47
Pabpn1Q8CCS6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC42.97■■■■■ 4.47
Pabpn1Q8CCS6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC42.97■■■■■ 4.47
Pabpn1Q8CCS6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC42.89■■■■■ 4.46
Pabpn1Q8CCS6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC42.87■■■■■ 4.45
Pabpn1Q8CCS6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC42.87■■■■■ 4.45
Pabpn1Q8CCS6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC42.83■■■■■ 4.45
Pabpn1Q8CCS6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC42.83■■■■■ 4.45
Pabpn1Q8CCS6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC42.78■■■■■ 4.44
Pabpn1Q8CCS6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC42.77■■■■■ 4.44
Pabpn1Q8CCS6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC42.74■■■■■ 4.43
Pabpn1Q8CCS6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC42.66■■■■■ 4.42
Pabpn1Q8CCS6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC42.64■■■■■ 4.42
Pabpn1Q8CCS6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC42.63■■■■■ 4.42
Pabpn1Q8CCS6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC42.62■■■■■ 4.41
Pabpn1Q8CCS6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC42.61■■■■■ 4.41
Pabpn1Q8CCS6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC42.52■■■■■ 4.4
Pabpn1Q8CCS6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC42.51■■■■■ 4.4
Pabpn1Q8CCS6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC42.49■■■■■ 4.39
Pabpn1Q8CCS6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC42.49■■■■■ 4.39
Pabpn1Q8CCS6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC42.48■■■■■ 4.39
Pabpn1Q8CCS6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC42.45■■■■■ 4.39
Pabpn1Q8CCS6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC42.45■■■■■ 4.39
Pabpn1Q8CCS6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC42.45■■■■■ 4.39
Pabpn1Q8CCS6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC42.45■■■■■ 4.39
Pabpn1Q8CCS6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC42.43■■■■■ 4.38
Pabpn1Q8CCS6 Zfp131-207ENSMUST00000224946 1783 ntBASIC42.42■■■■■ 4.38
Pabpn1Q8CCS6 Mipep-204ENSMUST00000225043 1548 ntBASIC42.41■■■■■ 4.38
Pabpn1Q8CCS6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC42.41■■■■■ 4.38
Pabpn1Q8CCS6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC42.4■■■■■ 4.38
Pabpn1Q8CCS6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC42.4■■■■■ 4.38
Pabpn1Q8CCS6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC42.37■■■■■ 4.37
Pabpn1Q8CCS6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC42.32■■■■■ 4.37
Pabpn1Q8CCS6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC42.3■■■■■ 4.36
Pabpn1Q8CCS6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC42.3■■■■■ 4.36
Pabpn1Q8CCS6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC42.29■■■■■ 4.36
Pabpn1Q8CCS6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC42.29■■■■■ 4.36
Pabpn1Q8CCS6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC42.29■■■■■ 4.36
Pabpn1Q8CCS6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC42.29■■■■■ 4.36
Pabpn1Q8CCS6 Gm42809-201ENSMUST00000198429 1138 ntBASIC42.28■■■■■ 4.36
Pabpn1Q8CCS6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC42.27■■■■■ 4.36
Pabpn1Q8CCS6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC42.27■■■■■ 4.36
Pabpn1Q8CCS6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC42.25■■■■■ 4.35
Pabpn1Q8CCS6 Mir6538-201ENSMUST00000183713 110 ntBASIC42.25■■■■■ 4.35
Pabpn1Q8CCS6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC42.25■■■■■ 4.35
Pabpn1Q8CCS6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC42.24■■■■■ 4.35
Pabpn1Q8CCS6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC42.23■■■■■ 4.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms