Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Ccdc187Q8C5V8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Ccdc187Q8C5V8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Ccdc187Q8C5V8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ccdc187Q8C5V8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc187Q8C5V8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
Ccdc187Q8C5V8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc187Q8C5V8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Ccdc187Q8C5V8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc187Q8C5V8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc187Q8C5V8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc187Q8C5V8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc187Q8C5V8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc187Q8C5V8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.87■■□□□ 1.89
Ccdc187Q8C5V8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc187Q8C5V8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc187Q8C5V8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc187Q8C5V8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.84■■□□□ 1.89
Ccdc187Q8C5V8 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.83■■□□□ 1.89
Ccdc187Q8C5V8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Ccdc187Q8C5V8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ccdc187Q8C5V8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.81■■□□□ 1.88
Ccdc187Q8C5V8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ccdc187Q8C5V8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ccdc187Q8C5V8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.78■■□□□ 1.88
Ccdc187Q8C5V8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ccdc187Q8C5V8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ccdc187Q8C5V8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.77■■□□□ 1.88
Ccdc187Q8C5V8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ccdc187Q8C5V8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.75■■□□□ 1.87
Ccdc187Q8C5V8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ccdc187Q8C5V8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ccdc187Q8C5V8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc187Q8C5V8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc187Q8C5V8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc187Q8C5V8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ccdc187Q8C5V8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Ccdc187Q8C5V8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.59■■□□□ 1.85
Ccdc187Q8C5V8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ccdc187Q8C5V8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ccdc187Q8C5V8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ccdc187Q8C5V8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ccdc187Q8C5V8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccdc187Q8C5V8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccdc187Q8C5V8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.54■■□□□ 1.84
Ccdc187Q8C5V8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc187Q8C5V8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.53■■□□□ 1.84
Ccdc187Q8C5V8 Gm45855-201ENSMUST00000212546 880 ntBASIC26.51■■□□□ 1.83
Ccdc187Q8C5V8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Ccdc187Q8C5V8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Ccdc187Q8C5V8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.46■■□□□ 1.83
Ccdc187Q8C5V8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc187Q8C5V8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc187Q8C5V8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc187Q8C5V8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ccdc187Q8C5V8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ccdc187Q8C5V8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ccdc187Q8C5V8 Gm9397-201ENSMUST00000200125 605 ntBASIC26.41■■□□□ 1.82
Ccdc187Q8C5V8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
Ccdc187Q8C5V8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Ccdc187Q8C5V8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Ccdc187Q8C5V8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ccdc187Q8C5V8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.39■■□□□ 1.82
Ccdc187Q8C5V8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Ccdc187Q8C5V8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ccdc187Q8C5V8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ccdc187Q8C5V8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc187Q8C5V8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc187Q8C5V8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc187Q8C5V8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.35■■□□□ 1.81
Ccdc187Q8C5V8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.35■■□□□ 1.81
Ccdc187Q8C5V8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc187Q8C5V8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
Ccdc187Q8C5V8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc187Q8C5V8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc187Q8C5V8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc187Q8C5V8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.31■■□□□ 1.8
Ccdc187Q8C5V8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc187Q8C5V8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.3■■□□□ 1.8
Ccdc187Q8C5V8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.28■■□□□ 1.8
Ccdc187Q8C5V8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc187Q8C5V8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc187Q8C5V8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc187Q8C5V8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc187Q8C5V8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc187Q8C5V8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc187Q8C5V8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ccdc187Q8C5V8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.22■■□□□ 1.79
Ccdc187Q8C5V8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
Ccdc187Q8C5V8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
Ccdc187Q8C5V8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Ccdc187Q8C5V8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.2■■□□□ 1.78
Ccdc187Q8C5V8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Ccdc187Q8C5V8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ccdc187Q8C5V8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Ccdc187Q8C5V8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Ccdc187Q8C5V8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ccdc187Q8C5V8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.17■■□□□ 1.78
Ccdc187Q8C5V8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc187Q8C5V8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms