Protein–RNA interactions for Protein: Q8BVU0

Lrch3, Leucine-rich repeat and calponin homology domain-containing protein 3, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch3Q8BVU0 Gm9397-201ENSMUST00000200125 605 ntBASIC30.02■■■□□ 2.4
Lrch3Q8BVU0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.02■■■□□ 2.4
Lrch3Q8BVU0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.98■■■□□ 2.39
Lrch3Q8BVU0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Lrch3Q8BVU0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Lrch3Q8BVU0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Lrch3Q8BVU0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Lrch3Q8BVU0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Lrch3Q8BVU0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Lrch3Q8BVU0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Lrch3Q8BVU0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.9■■■□□ 2.38
Lrch3Q8BVU0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Lrch3Q8BVU0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Lrch3Q8BVU0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Lrch3Q8BVU0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.85■■■□□ 2.37
Lrch3Q8BVU0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.83■■■□□ 2.37
Lrch3Q8BVU0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Lrch3Q8BVU0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Lrch3Q8BVU0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Lrch3Q8BVU0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Lrch3Q8BVU0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Lrch3Q8BVU0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Lrch3Q8BVU0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.73■■■□□ 2.35
Lrch3Q8BVU0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.72■■■□□ 2.35
Lrch3Q8BVU0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Lrch3Q8BVU0 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.68■■■□□ 2.34
Lrch3Q8BVU0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Lrch3Q8BVU0 Gm8503-201ENSMUST00000118131 455 ntBASIC29.65■■■□□ 2.34
Lrch3Q8BVU0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.65■■■□□ 2.34
Lrch3Q8BVU0 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.63■■■□□ 2.33
Lrch3Q8BVU0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.62■■■□□ 2.33
Lrch3Q8BVU0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Lrch3Q8BVU0 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.61■■■□□ 2.33
Lrch3Q8BVU0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Lrch3Q8BVU0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Lrch3Q8BVU0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.54■■■□□ 2.32
Lrch3Q8BVU0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Lrch3Q8BVU0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.52■■■□□ 2.32
Lrch3Q8BVU0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.51■■■□□ 2.31
Lrch3Q8BVU0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Lrch3Q8BVU0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.47■■■□□ 2.31
Lrch3Q8BVU0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.46■■■□□ 2.31
Lrch3Q8BVU0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Lrch3Q8BVU0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.43■■■□□ 2.3
Lrch3Q8BVU0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Lrch3Q8BVU0 Gm6821-201ENSMUST00000107540 542 ntBASIC29.4■■■□□ 2.3
Lrch3Q8BVU0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Lrch3Q8BVU0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Lrch3Q8BVU0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Lrch3Q8BVU0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Lrch3Q8BVU0 Gm24970-201ENSMUST00000175582 82 ntBASIC29.38■■■□□ 2.29
Lrch3Q8BVU0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.38■■■□□ 2.29
Lrch3Q8BVU0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.36■■■□□ 2.29
Lrch3Q8BVU0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Lrch3Q8BVU0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
Lrch3Q8BVU0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Lrch3Q8BVU0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Lrch3Q8BVU0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Lrch3Q8BVU0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Lrch3Q8BVU0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Lrch3Q8BVU0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.2■■■□□ 2.26
Lrch3Q8BVU0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Lrch3Q8BVU0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Lrch3Q8BVU0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.15■■■□□ 2.26
Lrch3Q8BVU0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Lrch3Q8BVU0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Lrch3Q8BVU0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Lrch3Q8BVU0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Lrch3Q8BVU0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.08■■■□□ 2.25
Lrch3Q8BVU0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Lrch3Q8BVU0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Lrch3Q8BVU0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Lrch3Q8BVU0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Lrch3Q8BVU0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.99■■■□□ 2.23
Lrch3Q8BVU0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.93■■■□□ 2.22
Lrch3Q8BVU0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Lrch3Q8BVU0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Lrch3Q8BVU0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Lrch3Q8BVU0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.9■■■□□ 2.22
Lrch3Q8BVU0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Lrch3Q8BVU0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Lrch3Q8BVU0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Lrch3Q8BVU0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Lrch3Q8BVU0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Lrch3Q8BVU0 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.87■■■□□ 2.21
Lrch3Q8BVU0 Mipep-204ENSMUST00000225043 1548 ntBASIC28.86■■■□□ 2.21
Lrch3Q8BVU0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
Lrch3Q8BVU0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.85■■■□□ 2.21
Lrch3Q8BVU0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.85■■■□□ 2.21
Lrch3Q8BVU0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Lrch3Q8BVU0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Lrch3Q8BVU0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
Lrch3Q8BVU0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.79■■■□□ 2.2
Lrch3Q8BVU0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.79■■■□□ 2.2
Lrch3Q8BVU0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
Lrch3Q8BVU0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.77■■■□□ 2.2
Lrch3Q8BVU0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Lrch3Q8BVU0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Lrch3Q8BVU0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Lrch3Q8BVU0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.76■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms