Protein–RNA interactions for Protein: Q8BVU0

Lrch3, Leucine-rich repeat and calponin homology domain-containing protein 3, mousemouse

Predictions only

Length 778 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch3Q8BVU0 Gm9397-201ENSMUST00000200125 605 ntBASIC30,02■■■□□ 2,4
Lrch3Q8BVU0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30,02■■■□□ 2,4
Lrch3Q8BVU0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29,98■■■□□ 2,39
Lrch3Q8BVU0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Lrch3Q8BVU0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29,95■■■□□ 2,39
Lrch3Q8BVU0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29,94■■■□□ 2,38
Lrch3Q8BVU0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Lrch3Q8BVU0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Lrch3Q8BVU0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Lrch3Q8BVU0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Lrch3Q8BVU0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29,9■■■□□ 2,38
Lrch3Q8BVU0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29,89■■■□□ 2,38
Lrch3Q8BVU0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
Lrch3Q8BVU0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Lrch3Q8BVU0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29,85■■■□□ 2,37
Lrch3Q8BVU0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29,83■■■□□ 2,37
Lrch3Q8BVU0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
Lrch3Q8BVU0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29,79■■■□□ 2,36
Lrch3Q8BVU0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29,74■■■□□ 2,35
Lrch3Q8BVU0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29,74■■■□□ 2,35
Lrch3Q8BVU0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29,74■■■□□ 2,35
Lrch3Q8BVU0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29,73■■■□□ 2,35
Lrch3Q8BVU0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29,73■■■□□ 2,35
Lrch3Q8BVU0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29,72■■■□□ 2,35
Lrch3Q8BVU0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29,69■■■□□ 2,34
Lrch3Q8BVU0 Gm9939-201ENSMUST00000067161 1154 ntBASIC29,68■■■□□ 2,34
Lrch3Q8BVU0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Lrch3Q8BVU0 Gm8503-201ENSMUST00000118131 455 ntBASIC29,65■■■□□ 2,34
Lrch3Q8BVU0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29,65■■■□□ 2,34
Lrch3Q8BVU0 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,63■■■□□ 2,33
Lrch3Q8BVU0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29,62■■■□□ 2,33
Lrch3Q8BVU0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Lrch3Q8BVU0 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,61■■■□□ 2,33
Lrch3Q8BVU0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Lrch3Q8BVU0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Lrch3Q8BVU0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29,54■■■□□ 2,32
Lrch3Q8BVU0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Lrch3Q8BVU0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29,52■■■□□ 2,32
Lrch3Q8BVU0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29,51■■■□□ 2,31
Lrch3Q8BVU0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Lrch3Q8BVU0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29,47■■■□□ 2,31
Lrch3Q8BVU0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29,46■■■□□ 2,31
Lrch3Q8BVU0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,43■■■□□ 2,3
Lrch3Q8BVU0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29,43■■■□□ 2,3
Lrch3Q8BVU0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29,42■■■□□ 2,3
Lrch3Q8BVU0 Gm6821-201ENSMUST00000107540 542 ntBASIC29,4■■■□□ 2,3
Lrch3Q8BVU0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,4■■■□□ 2,3
Lrch3Q8BVU0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,3
Lrch3Q8BVU0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,29
Lrch3Q8BVU0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29,38■■■□□ 2,29
Lrch3Q8BVU0 Gm24970-201ENSMUST00000175582 82 ntBASIC29,38■■■□□ 2,29
Lrch3Q8BVU0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29,38■■■□□ 2,29
Lrch3Q8BVU0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29,36■■■□□ 2,29
Lrch3Q8BVU0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Lrch3Q8BVU0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29,32■■■□□ 2,28
Lrch3Q8BVU0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29,27■■■□□ 2,28
Lrch3Q8BVU0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29,26■■■□□ 2,27
Lrch3Q8BVU0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Lrch3Q8BVU0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29,22■■■□□ 2,27
Lrch3Q8BVU0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29,2■■■□□ 2,26
Lrch3Q8BVU0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29,2■■■□□ 2,26
Lrch3Q8BVU0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29,19■■■□□ 2,26
Lrch3Q8BVU0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Lrch3Q8BVU0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29,15■■■□□ 2,26
Lrch3Q8BVU0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,26
Lrch3Q8BVU0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29,14■■■□□ 2,26
Lrch3Q8BVU0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29,12■■■□□ 2,25
Lrch3Q8BVU0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Lrch3Q8BVU0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29,08■■■□□ 2,25
Lrch3Q8BVU0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29,06■■■□□ 2,24
Lrch3Q8BVU0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Lrch3Q8BVU0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29,02■■■□□ 2,24
Lrch3Q8BVU0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28,99■■■□□ 2,23
Lrch3Q8BVU0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28,99■■■□□ 2,23
Lrch3Q8BVU0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28,93■■■□□ 2,22
Lrch3Q8BVU0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28,93■■■□□ 2,22
Lrch3Q8BVU0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28,93■■■□□ 2,22
Lrch3Q8BVU0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28,91■■■□□ 2,22
Lrch3Q8BVU0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28,9■■■□□ 2,22
Lrch3Q8BVU0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28,9■■■□□ 2,22
Lrch3Q8BVU0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28,9■■■□□ 2,22
Lrch3Q8BVU0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,89■■■□□ 2,21
Lrch3Q8BVU0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,88■■■□□ 2,21
Lrch3Q8BVU0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28,87■■■□□ 2,21
Lrch3Q8BVU0 Zfp131-207ENSMUST00000224946 1783 ntBASIC28,87■■■□□ 2,21
Lrch3Q8BVU0 Mipep-204ENSMUST00000225043 1548 ntBASIC28,86■■■□□ 2,21
Lrch3Q8BVU0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28,86■■■□□ 2,21
Lrch3Q8BVU0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28,85■■■□□ 2,21
Lrch3Q8BVU0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28,85■■■□□ 2,21
Lrch3Q8BVU0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28,81■■■□□ 2,2
Lrch3Q8BVU0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Lrch3Q8BVU0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28,79■■■□□ 2,2
Lrch3Q8BVU0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28,79■■■□□ 2,2
Lrch3Q8BVU0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28,79■■■□□ 2,2
Lrch3Q8BVU0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,79■■■□□ 2,2
Lrch3Q8BVU0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28,77■■■□□ 2,2
Lrch3Q8BVU0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Lrch3Q8BVU0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Lrch3Q8BVU0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Lrch3Q8BVU0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28,76■■■□□ 2,19
Retrieved 100 of 76,532 protein–RNA pairs in 12,7 ms