Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nhlrc1Q8BR37 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhlrc1Q8BR37 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nhlrc1Q8BR37 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nhlrc1Q8BR37 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.22■□□□□ 0.83
Nhlrc1Q8BR37 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nhlrc1Q8BR37 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nhlrc1Q8BR37 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhlrc1Q8BR37 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhlrc1Q8BR37 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nhlrc1Q8BR37 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nhlrc1Q8BR37 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Nhlrc1Q8BR37 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhlrc1Q8BR37 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nhlrc1Q8BR37 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.13■□□□□ 0.81
Nhlrc1Q8BR37 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nhlrc1Q8BR37 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhlrc1Q8BR37 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Nhlrc1Q8BR37 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhlrc1Q8BR37 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhlrc1Q8BR37 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nhlrc1Q8BR37 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.08■□□□□ 0.81
Nhlrc1Q8BR37 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nhlrc1Q8BR37 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.07■□□□□ 0.8
Nhlrc1Q8BR37 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.06■□□□□ 0.8
Nhlrc1Q8BR37 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.05■□□□□ 0.8
Nhlrc1Q8BR37 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Nhlrc1Q8BR37 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nhlrc1Q8BR37 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.03■□□□□ 0.8
Nhlrc1Q8BR37 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nhlrc1Q8BR37 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhlrc1Q8BR37 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nhlrc1Q8BR37 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhlrc1Q8BR37 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhlrc1Q8BR37 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nhlrc1Q8BR37 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.97■□□□□ 0.79
Nhlrc1Q8BR37 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhlrc1Q8BR37 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhlrc1Q8BR37 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nhlrc1Q8BR37 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nhlrc1Q8BR37 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nhlrc1Q8BR37 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nhlrc1Q8BR37 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.91■□□□□ 0.78
Nhlrc1Q8BR37 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nhlrc1Q8BR37 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.9■□□□□ 0.78
Nhlrc1Q8BR37 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nhlrc1Q8BR37 Gm45855-201ENSMUST00000212546 880 ntBASIC19.89■□□□□ 0.77
Nhlrc1Q8BR37 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nhlrc1Q8BR37 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.88■□□□□ 0.77
Nhlrc1Q8BR37 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nhlrc1Q8BR37 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nhlrc1Q8BR37 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nhlrc1Q8BR37 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.86■□□□□ 0.77
Nhlrc1Q8BR37 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nhlrc1Q8BR37 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nhlrc1Q8BR37 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nhlrc1Q8BR37 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nhlrc1Q8BR37 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Nhlrc1Q8BR37 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nhlrc1Q8BR37 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nhlrc1Q8BR37 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nhlrc1Q8BR37 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.8■□□□□ 0.76
Nhlrc1Q8BR37 Gm9397-201ENSMUST00000200125 605 ntBASIC19.8■□□□□ 0.76
Nhlrc1Q8BR37 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nhlrc1Q8BR37 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nhlrc1Q8BR37 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nhlrc1Q8BR37 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nhlrc1Q8BR37 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.76■□□□□ 0.75
Nhlrc1Q8BR37 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Nhlrc1Q8BR37 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nhlrc1Q8BR37 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.73■□□□□ 0.75
Nhlrc1Q8BR37 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Nhlrc1Q8BR37 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhlrc1Q8BR37 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc1Q8BR37 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.71■□□□□ 0.75
Nhlrc1Q8BR37 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc1Q8BR37 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc1Q8BR37 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nhlrc1Q8BR37 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.68■□□□□ 0.74
Nhlrc1Q8BR37 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nhlrc1Q8BR37 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc1Q8BR37 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc1Q8BR37 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nhlrc1Q8BR37 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nhlrc1Q8BR37 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.65■□□□□ 0.74
Nhlrc1Q8BR37 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Nhlrc1Q8BR37 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhlrc1Q8BR37 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhlrc1Q8BR37 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Nhlrc1Q8BR37 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.63■□□□□ 0.73
Nhlrc1Q8BR37 Gm24970-201ENSMUST00000175582 82 ntBASIC19.63■□□□□ 0.73
Nhlrc1Q8BR37 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nhlrc1Q8BR37 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nhlrc1Q8BR37 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Nhlrc1Q8BR37 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nhlrc1Q8BR37 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nhlrc1Q8BR37 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nhlrc1Q8BR37 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nhlrc1Q8BR37 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nhlrc1Q8BR37 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms