Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmbox1Q8BJA3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmbox1Q8BJA3 Gm16148-201ENSMUST00000119653 893 ntBASIC25.4■■□□□ 1.66
Hmbox1Q8BJA3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Hmbox1Q8BJA3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hmbox1Q8BJA3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.36■■□□□ 1.65
Hmbox1Q8BJA3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Hmbox1Q8BJA3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Hmbox1Q8BJA3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Hmbox1Q8BJA3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Hmbox1Q8BJA3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.33■■□□□ 1.65
Hmbox1Q8BJA3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Hmbox1Q8BJA3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hmbox1Q8BJA3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hmbox1Q8BJA3 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.3■■□□□ 1.64
Hmbox1Q8BJA3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hmbox1Q8BJA3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Hmbox1Q8BJA3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hmbox1Q8BJA3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Hmbox1Q8BJA3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Hmbox1Q8BJA3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hmbox1Q8BJA3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.23■■□□□ 1.63
Hmbox1Q8BJA3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Hmbox1Q8BJA3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Hmbox1Q8BJA3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Hmbox1Q8BJA3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Hmbox1Q8BJA3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
Hmbox1Q8BJA3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Hmbox1Q8BJA3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.19■■□□□ 1.62
Hmbox1Q8BJA3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Hmbox1Q8BJA3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.15■■□□□ 1.62
Hmbox1Q8BJA3 Gm45855-201ENSMUST00000212546 880 ntBASIC25.14■■□□□ 1.62
Hmbox1Q8BJA3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Hmbox1Q8BJA3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hmbox1Q8BJA3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Hmbox1Q8BJA3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Hmbox1Q8BJA3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.1■■□□□ 1.61
Hmbox1Q8BJA3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Hmbox1Q8BJA3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.07■■□□□ 1.6
Hmbox1Q8BJA3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hmbox1Q8BJA3 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.07■■□□□ 1.6
Hmbox1Q8BJA3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.04■■□□□ 1.6
Hmbox1Q8BJA3 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.04■■□□□ 1.6
Hmbox1Q8BJA3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Hmbox1Q8BJA3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Hmbox1Q8BJA3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.01■■□□□ 1.59
Hmbox1Q8BJA3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Hmbox1Q8BJA3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Hmbox1Q8BJA3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Hmbox1Q8BJA3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Hmbox1Q8BJA3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Hmbox1Q8BJA3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Hmbox1Q8BJA3 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.98■■□□□ 1.59
Hmbox1Q8BJA3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Hmbox1Q8BJA3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Hmbox1Q8BJA3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Hmbox1Q8BJA3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Hmbox1Q8BJA3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Hmbox1Q8BJA3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Hmbox1Q8BJA3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Hmbox1Q8BJA3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Hmbox1Q8BJA3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Hmbox1Q8BJA3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Hmbox1Q8BJA3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Hmbox1Q8BJA3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
Hmbox1Q8BJA3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Hmbox1Q8BJA3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Hmbox1Q8BJA3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.88■■□□□ 1.57
Hmbox1Q8BJA3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Hmbox1Q8BJA3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Hmbox1Q8BJA3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Hmbox1Q8BJA3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Hmbox1Q8BJA3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Hmbox1Q8BJA3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Hmbox1Q8BJA3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hmbox1Q8BJA3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.81■■□□□ 1.56
Hmbox1Q8BJA3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Hmbox1Q8BJA3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Hmbox1Q8BJA3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Hmbox1Q8BJA3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hmbox1Q8BJA3 Peli2-204ENSMUST00000226513 1320 ntBASIC24.79■■□□□ 1.56
Hmbox1Q8BJA3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Hmbox1Q8BJA3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Hmbox1Q8BJA3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Hmbox1Q8BJA3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hmbox1Q8BJA3 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.77■■□□□ 1.56
Hmbox1Q8BJA3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hmbox1Q8BJA3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hmbox1Q8BJA3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hmbox1Q8BJA3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Hmbox1Q8BJA3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Hmbox1Q8BJA3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Hmbox1Q8BJA3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Hmbox1Q8BJA3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Hmbox1Q8BJA3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
Hmbox1Q8BJA3 Gm9397-201ENSMUST00000200125 605 ntBASIC24.67■■□□□ 1.54
Hmbox1Q8BJA3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Hmbox1Q8BJA3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hmbox1Q8BJA3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hmbox1Q8BJA3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms