Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31,68■■■□□ 2,66
SpidrQ8BGX7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31,66■■■□□ 2,66
SpidrQ8BGX7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31,66■■■□□ 2,66
SpidrQ8BGX7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31,64■■■□□ 2,66
SpidrQ8BGX7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31,62■■■□□ 2,65
SpidrQ8BGX7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31,61■■■□□ 2,65
SpidrQ8BGX7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31,6■■■□□ 2,65
SpidrQ8BGX7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31,58■■■□□ 2,65
SpidrQ8BGX7 Tdp2-203ENSMUST00000223804 1136 ntBASIC31,58■■■□□ 2,65
SpidrQ8BGX7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31,56■■■□□ 2,64
SpidrQ8BGX7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31,56■■■□□ 2,64
SpidrQ8BGX7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31,56■■■□□ 2,64
SpidrQ8BGX7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31,55■■■□□ 2,64
SpidrQ8BGX7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31,53■■■□□ 2,64
SpidrQ8BGX7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31,52■■■□□ 2,64
SpidrQ8BGX7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
SpidrQ8BGX7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31,49■■■□□ 2,63
SpidrQ8BGX7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31,48■■■□□ 2,63
SpidrQ8BGX7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31,46■■■□□ 2,63
SpidrQ8BGX7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31,44■■■□□ 2,62
SpidrQ8BGX7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31,43■■■□□ 2,62
SpidrQ8BGX7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31,43■■■□□ 2,62
SpidrQ8BGX7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31,42■■■□□ 2,62
SpidrQ8BGX7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31,39■■■□□ 2,62
SpidrQ8BGX7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31,39■■■□□ 2,62
SpidrQ8BGX7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
SpidrQ8BGX7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31,34■■■□□ 2,61
SpidrQ8BGX7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31,34■■■□□ 2,61
SpidrQ8BGX7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31,33■■■□□ 2,61
SpidrQ8BGX7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
SpidrQ8BGX7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31,29■■■□□ 2,6
SpidrQ8BGX7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31,29■■■□□ 2,6
SpidrQ8BGX7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31,26■■■□□ 2,6
SpidrQ8BGX7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31,26■■■□□ 2,6
SpidrQ8BGX7 Gm45855-201ENSMUST00000212546 880 ntBASIC31,24■■■□□ 2,59
SpidrQ8BGX7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31,24■■■□□ 2,59
SpidrQ8BGX7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31,2■■■□□ 2,59
SpidrQ8BGX7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31,2■■■□□ 2,59
SpidrQ8BGX7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31,2■■■□□ 2,58
SpidrQ8BGX7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31,18■■■□□ 2,58
SpidrQ8BGX7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
SpidrQ8BGX7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31,17■■■□□ 2,58
SpidrQ8BGX7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31,16■■■□□ 2,58
SpidrQ8BGX7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31,15■■■□□ 2,58
SpidrQ8BGX7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
SpidrQ8BGX7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31,11■■■□□ 2,57
SpidrQ8BGX7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31,1■■■□□ 2,57
SpidrQ8BGX7 Gm9397-201ENSMUST00000200125 605 ntBASIC31,1■■■□□ 2,57
SpidrQ8BGX7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31,09■■■□□ 2,57
SpidrQ8BGX7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31,09■■■□□ 2,57
SpidrQ8BGX7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
SpidrQ8BGX7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31,06■■■□□ 2,56
SpidrQ8BGX7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
SpidrQ8BGX7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31,03■■■□□ 2,56
SpidrQ8BGX7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31,01■■■□□ 2,55
SpidrQ8BGX7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30,99■■■□□ 2,55
SpidrQ8BGX7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30,99■■■□□ 2,55
SpidrQ8BGX7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30,98■■■□□ 2,55
SpidrQ8BGX7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30,98■■■□□ 2,55
SpidrQ8BGX7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30,98■■■□□ 2,55
SpidrQ8BGX7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30,95■■■□□ 2,55
SpidrQ8BGX7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30,95■■■□□ 2,55
SpidrQ8BGX7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30,95■■■□□ 2,54
SpidrQ8BGX7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30,94■■■□□ 2,54
SpidrQ8BGX7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30,92■■■□□ 2,54
SpidrQ8BGX7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30,92■■■□□ 2,54
SpidrQ8BGX7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
SpidrQ8BGX7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
SpidrQ8BGX7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
SpidrQ8BGX7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30,9■■■□□ 2,54
SpidrQ8BGX7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30,89■■■□□ 2,54
SpidrQ8BGX7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
SpidrQ8BGX7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30,88■■■□□ 2,53
SpidrQ8BGX7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30,87■■■□□ 2,53
SpidrQ8BGX7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30,86■■■□□ 2,53
SpidrQ8BGX7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,85■■■□□ 2,53
SpidrQ8BGX7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30,85■■■□□ 2,53
SpidrQ8BGX7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30,84■■■□□ 2,53
SpidrQ8BGX7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
SpidrQ8BGX7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30,83■■■□□ 2,53
SpidrQ8BGX7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30,82■■■□□ 2,52
SpidrQ8BGX7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30,82■■■□□ 2,52
SpidrQ8BGX7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
SpidrQ8BGX7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
SpidrQ8BGX7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30,79■■■□□ 2,52
SpidrQ8BGX7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30,78■■■□□ 2,52
SpidrQ8BGX7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30,78■■■□□ 2,52
SpidrQ8BGX7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30,77■■■□□ 2,52
SpidrQ8BGX7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
SpidrQ8BGX7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
SpidrQ8BGX7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
SpidrQ8BGX7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30,72■■■□□ 2,51
SpidrQ8BGX7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30,71■■■□□ 2,51
SpidrQ8BGX7 Gm24970-201ENSMUST00000175582 82 ntBASIC30,71■■■□□ 2,51
SpidrQ8BGX7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30,7■■■□□ 2,51
SpidrQ8BGX7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30,7■■■□□ 2,5
SpidrQ8BGX7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
SpidrQ8BGX7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30,68■■■□□ 2,5
SpidrQ8BGX7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
SpidrQ8BGX7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30,65■■■□□ 2,5
Retrieved 100 of 76,532 protein–RNA pairs in 10,7 ms