Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SpidrQ8BGX7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
SpidrQ8BGX7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SpidrQ8BGX7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SpidrQ8BGX7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
SpidrQ8BGX7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
SpidrQ8BGX7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SpidrQ8BGX7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SpidrQ8BGX7 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.58■■■□□ 2.65
SpidrQ8BGX7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.56■■■□□ 2.64
SpidrQ8BGX7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SpidrQ8BGX7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SpidrQ8BGX7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.55■■■□□ 2.64
SpidrQ8BGX7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SpidrQ8BGX7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.52■■■□□ 2.64
SpidrQ8BGX7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SpidrQ8BGX7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SpidrQ8BGX7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.48■■■□□ 2.63
SpidrQ8BGX7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SpidrQ8BGX7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SpidrQ8BGX7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.43■■■□□ 2.62
SpidrQ8BGX7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.43■■■□□ 2.62
SpidrQ8BGX7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SpidrQ8BGX7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
SpidrQ8BGX7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.39■■■□□ 2.62
SpidrQ8BGX7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SpidrQ8BGX7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.34■■■□□ 2.61
SpidrQ8BGX7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SpidrQ8BGX7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SpidrQ8BGX7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SpidrQ8BGX7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
SpidrQ8BGX7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SpidrQ8BGX7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
SpidrQ8BGX7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SpidrQ8BGX7 Gm45855-201ENSMUST00000212546 880 ntBASIC31.24■■■□□ 2.59
SpidrQ8BGX7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SpidrQ8BGX7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SpidrQ8BGX7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.2■■■□□ 2.59
SpidrQ8BGX7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SpidrQ8BGX7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
SpidrQ8BGX7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SpidrQ8BGX7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SpidrQ8BGX7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
SpidrQ8BGX7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.15■■■□□ 2.58
SpidrQ8BGX7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SpidrQ8BGX7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SpidrQ8BGX7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SpidrQ8BGX7 Gm9397-201ENSMUST00000200125 605 ntBASIC31.1■■■□□ 2.57
SpidrQ8BGX7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SpidrQ8BGX7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.09■■■□□ 2.57
SpidrQ8BGX7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SpidrQ8BGX7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SpidrQ8BGX7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SpidrQ8BGX7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SpidrQ8BGX7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SpidrQ8BGX7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
SpidrQ8BGX7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.99■■■□□ 2.55
SpidrQ8BGX7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SpidrQ8BGX7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.98■■■□□ 2.55
SpidrQ8BGX7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SpidrQ8BGX7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
SpidrQ8BGX7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.95■■■□□ 2.55
SpidrQ8BGX7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
SpidrQ8BGX7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.94■■■□□ 2.54
SpidrQ8BGX7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.92■■■□□ 2.54
SpidrQ8BGX7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SpidrQ8BGX7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SpidrQ8BGX7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SpidrQ8BGX7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SpidrQ8BGX7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SpidrQ8BGX7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
SpidrQ8BGX7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SpidrQ8BGX7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
SpidrQ8BGX7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
SpidrQ8BGX7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
SpidrQ8BGX7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SpidrQ8BGX7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
SpidrQ8BGX7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
SpidrQ8BGX7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SpidrQ8BGX7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.83■■■□□ 2.53
SpidrQ8BGX7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SpidrQ8BGX7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
SpidrQ8BGX7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SpidrQ8BGX7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SpidrQ8BGX7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.79■■■□□ 2.52
SpidrQ8BGX7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.78■■■□□ 2.52
SpidrQ8BGX7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SpidrQ8BGX7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SpidrQ8BGX7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SpidrQ8BGX7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SpidrQ8BGX7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SpidrQ8BGX7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
SpidrQ8BGX7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.71■■■□□ 2.51
SpidrQ8BGX7 Gm24970-201ENSMUST00000175582 82 ntBASIC30.71■■■□□ 2.51
SpidrQ8BGX7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.7■■■□□ 2.51
SpidrQ8BGX7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
SpidrQ8BGX7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SpidrQ8BGX7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SpidrQ8BGX7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SpidrQ8BGX7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms