Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Prpf40bQ80W14 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Prpf40bQ80W14 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.46■■■□□ 2.47
Prpf40bQ80W14 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Prpf40bQ80W14 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.43■■■□□ 2.46
Prpf40bQ80W14 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Prpf40bQ80W14 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Prpf40bQ80W14 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Prpf40bQ80W14 Gm45855-201ENSMUST00000212546 880 ntBASIC30.39■■■□□ 2.46
Prpf40bQ80W14 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Prpf40bQ80W14 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Prpf40bQ80W14 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.37■■■□□ 2.45
Prpf40bQ80W14 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Prpf40bQ80W14 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Prpf40bQ80W14 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Prpf40bQ80W14 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Prpf40bQ80W14 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.31■■■□□ 2.44
Prpf40bQ80W14 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Prpf40bQ80W14 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Prpf40bQ80W14 Peli2-204ENSMUST00000226513 1320 ntBASIC30.27■■■□□ 2.44
Prpf40bQ80W14 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Prpf40bQ80W14 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Prpf40bQ80W14 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Prpf40bQ80W14 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.23■■■□□ 2.43
Prpf40bQ80W14 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Prpf40bQ80W14 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Prpf40bQ80W14 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Prpf40bQ80W14 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Prpf40bQ80W14 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Prpf40bQ80W14 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Prpf40bQ80W14 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Prpf40bQ80W14 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Prpf40bQ80W14 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Prpf40bQ80W14 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Prpf40bQ80W14 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Prpf40bQ80W14 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Prpf40bQ80W14 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.06■■■□□ 2.4
Prpf40bQ80W14 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.06■■■□□ 2.4
Prpf40bQ80W14 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
Prpf40bQ80W14 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Prpf40bQ80W14 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Prpf40bQ80W14 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.99■■■□□ 2.39
Prpf40bQ80W14 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Prpf40bQ80W14 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Prpf40bQ80W14 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Prpf40bQ80W14 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Prpf40bQ80W14 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Prpf40bQ80W14 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Prpf40bQ80W14 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Prpf40bQ80W14 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.96■■■□□ 2.39
Prpf40bQ80W14 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Prpf40bQ80W14 Gm9397-201ENSMUST00000200125 605 ntBASIC29.95■■■□□ 2.39
Prpf40bQ80W14 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Prpf40bQ80W14 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Prpf40bQ80W14 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Prpf40bQ80W14 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.91■■■□□ 2.38
Prpf40bQ80W14 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Prpf40bQ80W14 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Prpf40bQ80W14 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Prpf40bQ80W14 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Prpf40bQ80W14 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.87■■■□□ 2.37
Prpf40bQ80W14 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Prpf40bQ80W14 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Prpf40bQ80W14 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Prpf40bQ80W14 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.84■■■□□ 2.37
Prpf40bQ80W14 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.84■■■□□ 2.37
Prpf40bQ80W14 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Prpf40bQ80W14 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Prpf40bQ80W14 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Prpf40bQ80W14 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Prpf40bQ80W14 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Prpf40bQ80W14 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.76■■■□□ 2.35
Prpf40bQ80W14 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Prpf40bQ80W14 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Prpf40bQ80W14 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.75■■■□□ 2.35
Prpf40bQ80W14 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.75■■■□□ 2.35
Prpf40bQ80W14 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.75■■■□□ 2.35
Prpf40bQ80W14 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Prpf40bQ80W14 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.74■■■□□ 2.35
Prpf40bQ80W14 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Prpf40bQ80W14 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Prpf40bQ80W14 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.72■■■□□ 2.35
Prpf40bQ80W14 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.71■■■□□ 2.35
Prpf40bQ80W14 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.69■■■□□ 2.34
Prpf40bQ80W14 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Prpf40bQ80W14 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
Prpf40bQ80W14 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Prpf40bQ80W14 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
Prpf40bQ80W14 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.62■■■□□ 2.33
Prpf40bQ80W14 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Prpf40bQ80W14 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.61■■■□□ 2.33
Prpf40bQ80W14 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
Prpf40bQ80W14 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Prpf40bQ80W14 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.56■■■□□ 2.32
Prpf40bQ80W14 Mipep-204ENSMUST00000225043 1548 ntBASIC29.55■■■□□ 2.32
Prpf40bQ80W14 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.53■■■□□ 2.32
Prpf40bQ80W14 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Prpf40bQ80W14 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Prpf40bQ80W14 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Prpf40bQ80W14 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms