Protein–RNA interactions for Protein: Q80VR2

Ell3, RNA polymerase II elongation factor ELL3, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ell3Q80VR2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ell3Q80VR2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Ell3Q80VR2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ell3Q80VR2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ell3Q80VR2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ell3Q80VR2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ell3Q80VR2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ell3Q80VR2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ell3Q80VR2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ell3Q80VR2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ell3Q80VR2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ell3Q80VR2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ell3Q80VR2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ell3Q80VR2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ell3Q80VR2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ell3Q80VR2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.85■□□□□ 0.93
Ell3Q80VR2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ell3Q80VR2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ell3Q80VR2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ell3Q80VR2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ell3Q80VR2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ell3Q80VR2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ell3Q80VR2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ell3Q80VR2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ell3Q80VR2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ell3Q80VR2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ell3Q80VR2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ell3Q80VR2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ell3Q80VR2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ell3Q80VR2 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.79■□□□□ 0.92
Ell3Q80VR2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ell3Q80VR2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ell3Q80VR2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ell3Q80VR2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ell3Q80VR2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ell3Q80VR2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ell3Q80VR2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ell3Q80VR2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ell3Q80VR2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ell3Q80VR2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ell3Q80VR2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ell3Q80VR2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Ell3Q80VR2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ell3Q80VR2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.66■□□□□ 0.9
Ell3Q80VR2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ell3Q80VR2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ell3Q80VR2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.64■□□□□ 0.89
Ell3Q80VR2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ell3Q80VR2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ell3Q80VR2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ell3Q80VR2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ell3Q80VR2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ell3Q80VR2 Amer2-203ENSMUST00000225247 2662 ntBASIC20.6■□□□□ 0.89
Ell3Q80VR2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ell3Q80VR2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ell3Q80VR2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ell3Q80VR2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Ell3Q80VR2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ell3Q80VR2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ell3Q80VR2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ell3Q80VR2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ell3Q80VR2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ell3Q80VR2 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.55■□□□□ 0.88
Ell3Q80VR2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ell3Q80VR2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.53■□□□□ 0.88
Ell3Q80VR2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ell3Q80VR2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ell3Q80VR2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ell3Q80VR2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ell3Q80VR2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ell3Q80VR2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ell3Q80VR2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ell3Q80VR2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ell3Q80VR2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ell3Q80VR2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ell3Q80VR2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ell3Q80VR2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ell3Q80VR2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ell3Q80VR2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.48■□□□□ 0.87
Ell3Q80VR2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ell3Q80VR2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ell3Q80VR2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Ell3Q80VR2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ell3Q80VR2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ell3Q80VR2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ell3Q80VR2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ell3Q80VR2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ell3Q80VR2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ell3Q80VR2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ell3Q80VR2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ell3Q80VR2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ell3Q80VR2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ell3Q80VR2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.42■□□□□ 0.86
Ell3Q80VR2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.41■□□□□ 0.86
Ell3Q80VR2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ell3Q80VR2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ell3Q80VR2 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.39■□□□□ 0.85
Ell3Q80VR2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ell3Q80VR2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ell3Q80VR2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms