Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28,89■■■□□ 2,22
Sh3tc2Q80VA5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28,88■■■□□ 2,21
Sh3tc2Q80VA5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28,88■■■□□ 2,21
Sh3tc2Q80VA5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28,87■■■□□ 2,21
Sh3tc2Q80VA5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28,87■■■□□ 2,21
Sh3tc2Q80VA5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28,86■■■□□ 2,21
Sh3tc2Q80VA5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28,85■■■□□ 2,21
Sh3tc2Q80VA5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28,85■■■□□ 2,21
Sh3tc2Q80VA5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28,84■■■□□ 2,21
Sh3tc2Q80VA5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28,84■■■□□ 2,21
Sh3tc2Q80VA5 Zfp131-207ENSMUST00000224946 1783 ntBASIC28,78■■■□□ 2,2
Sh3tc2Q80VA5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28,77■■■□□ 2,2
Sh3tc2Q80VA5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,19
Sh3tc2Q80VA5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,19
Sh3tc2Q80VA5 Gm45855-201ENSMUST00000212546 880 ntBASIC28,72■■■□□ 2,19
Sh3tc2Q80VA5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28,71■■■□□ 2,19
Sh3tc2Q80VA5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28,71■■■□□ 2,19
Sh3tc2Q80VA5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Sh3tc2Q80VA5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Sh3tc2Q80VA5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Sh3tc2Q80VA5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28,64■■■□□ 2,18
Sh3tc2Q80VA5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28,64■■■□□ 2,18
Sh3tc2Q80VA5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Sh3tc2Q80VA5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28,62■■■□□ 2,17
Sh3tc2Q80VA5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28,59■■■□□ 2,17
Sh3tc2Q80VA5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28,58■■■□□ 2,17
Sh3tc2Q80VA5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
Sh3tc2Q80VA5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28,56■■■□□ 2,16
Sh3tc2Q80VA5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28,55■■■□□ 2,16
Sh3tc2Q80VA5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28,54■■■□□ 2,16
Sh3tc2Q80VA5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28,54■■■□□ 2,16
Sh3tc2Q80VA5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28,52■■■□□ 2,16
Sh3tc2Q80VA5 Mipep-204ENSMUST00000225043 1548 ntBASIC28,51■■■□□ 2,15
Sh3tc2Q80VA5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Sh3tc2Q80VA5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28,5■■■□□ 2,15
Sh3tc2Q80VA5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28,5■■■□□ 2,15
Sh3tc2Q80VA5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28,5■■■□□ 2,15
Sh3tc2Q80VA5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Sh3tc2Q80VA5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28,46■■■□□ 2,15
Sh3tc2Q80VA5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28,44■■■□□ 2,14
Sh3tc2Q80VA5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28,42■■■□□ 2,14
Sh3tc2Q80VA5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28,42■■■□□ 2,14
Sh3tc2Q80VA5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Sh3tc2Q80VA5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28,39■■■□□ 2,14
Sh3tc2Q80VA5 Gm9397-201ENSMUST00000200125 605 ntBASIC28,39■■■□□ 2,14
Sh3tc2Q80VA5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28,39■■■□□ 2,13
Sh3tc2Q80VA5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28,38■■■□□ 2,13
Sh3tc2Q80VA5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28,37■■■□□ 2,13
Sh3tc2Q80VA5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28,37■■■□□ 2,13
Sh3tc2Q80VA5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Sh3tc2Q80VA5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Sh3tc2Q80VA5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28,35■■■□□ 2,13
Sh3tc2Q80VA5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28,35■■■□□ 2,13
Sh3tc2Q80VA5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28,35■■■□□ 2,13
Sh3tc2Q80VA5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Sh3tc2Q80VA5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28,33■■■□□ 2,13
Sh3tc2Q80VA5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28,32■■■□□ 2,12
Sh3tc2Q80VA5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28,32■■■□□ 2,12
Sh3tc2Q80VA5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28,31■■■□□ 2,12
Sh3tc2Q80VA5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28,31■■■□□ 2,12
Sh3tc2Q80VA5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Sh3tc2Q80VA5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28,28■■■□□ 2,12
Sh3tc2Q80VA5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28,28■■■□□ 2,12
Sh3tc2Q80VA5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28,28■■■□□ 2,12
Sh3tc2Q80VA5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28,27■■■□□ 2,12
Sh3tc2Q80VA5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28,26■■■□□ 2,11
Sh3tc2Q80VA5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28,24■■■□□ 2,11
Sh3tc2Q80VA5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Sh3tc2Q80VA5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Sh3tc2Q80VA5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28,21■■■□□ 2,11
Sh3tc2Q80VA5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28,18■■■□□ 2,1
Sh3tc2Q80VA5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28,18■■■□□ 2,1
Sh3tc2Q80VA5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28,16■■■□□ 2,1
Sh3tc2Q80VA5 Gm5987-201ENSMUST00000196433 1151 ntBASIC28,15■■■□□ 2,1
Sh3tc2Q80VA5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28,14■■■□□ 2,1
Sh3tc2Q80VA5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,1
Sh3tc2Q80VA5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,09
Sh3tc2Q80VA5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28,13■■■□□ 2,09
Sh3tc2Q80VA5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28,12■■■□□ 2,09
Sh3tc2Q80VA5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28,1■■■□□ 2,09
Sh3tc2Q80VA5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28,1■■■□□ 2,09
Sh3tc2Q80VA5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28,1■■■□□ 2,09
Sh3tc2Q80VA5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28,1■■■□□ 2,09
Sh3tc2Q80VA5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28,09■■■□□ 2,09
Sh3tc2Q80VA5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Sh3tc2Q80VA5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28,07■■■□□ 2,08
Sh3tc2Q80VA5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28,07■■■□□ 2,08
Sh3tc2Q80VA5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28,06■■■□□ 2,08
Sh3tc2Q80VA5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28,05■■■□□ 2,08
Sh3tc2Q80VA5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28,05■■■□□ 2,08
Sh3tc2Q80VA5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Sh3tc2Q80VA5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28,02■■■□□ 2,08
Sh3tc2Q80VA5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28,01■■■□□ 2,07
Sh3tc2Q80VA5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27,98■■■□□ 2,07
Sh3tc2Q80VA5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27,98■■■□□ 2,07
Sh3tc2Q80VA5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27,97■■■□□ 2,07
Sh3tc2Q80VA5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27,97■■■□□ 2,07
Sh3tc2Q80VA5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27,97■■■□□ 2,07
Sh3tc2Q80VA5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27,96■■■□□ 2,07
Sh3tc2Q80VA5 Gm24970-201ENSMUST00000175582 82 ntBASIC27,94■■■□□ 2,06
Retrieved 100 of 76,532 protein–RNA pairs in 31,6 ms