Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Ube3cQ80U95 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Ube3cQ80U95 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ube3cQ80U95 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.68
Ube3cQ80U95 Zfp131-205ENSMUST00000223812 663 ntBASIC31.76■■■□□ 2.67
Ube3cQ80U95 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.75■■■□□ 2.67
Ube3cQ80U95 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ube3cQ80U95 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Ube3cQ80U95 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ube3cQ80U95 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ube3cQ80U95 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Ube3cQ80U95 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Ube3cQ80U95 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ube3cQ80U95 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ube3cQ80U95 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ube3cQ80U95 Gm16148-201ENSMUST00000119653 893 ntBASIC31.64■■■□□ 2.66
Ube3cQ80U95 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Ube3cQ80U95 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ube3cQ80U95 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ube3cQ80U95 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ube3cQ80U95 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Ube3cQ80U95 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Ube3cQ80U95 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ube3cQ80U95 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.6■■■□□ 2.65
Ube3cQ80U95 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Ube3cQ80U95 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Ube3cQ80U95 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ube3cQ80U95 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ube3cQ80U95 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ube3cQ80U95 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Ube3cQ80U95 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.51■■■□□ 2.63
Ube3cQ80U95 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
Ube3cQ80U95 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
Ube3cQ80U95 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.45■■■□□ 2.63
Ube3cQ80U95 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ube3cQ80U95 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ube3cQ80U95 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.41■■■□□ 2.62
Ube3cQ80U95 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
Ube3cQ80U95 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Ube3cQ80U95 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ube3cQ80U95 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Ube3cQ80U95 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ube3cQ80U95 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.36■■■□□ 2.61
Ube3cQ80U95 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Ube3cQ80U95 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ube3cQ80U95 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ube3cQ80U95 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ube3cQ80U95 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ube3cQ80U95 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ube3cQ80U95 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
Ube3cQ80U95 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Ube3cQ80U95 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.25■■■□□ 2.59
Ube3cQ80U95 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Ube3cQ80U95 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ube3cQ80U95 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ube3cQ80U95 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ube3cQ80U95 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ube3cQ80U95 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ube3cQ80U95 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.12■■■□□ 2.57
Ube3cQ80U95 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ube3cQ80U95 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
Ube3cQ80U95 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.1■■■□□ 2.57
Ube3cQ80U95 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.1■■■□□ 2.57
Ube3cQ80U95 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ube3cQ80U95 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ube3cQ80U95 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ube3cQ80U95 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
Ube3cQ80U95 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.05■■■□□ 2.56
Ube3cQ80U95 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ube3cQ80U95 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.02■■■□□ 2.56
Ube3cQ80U95 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ube3cQ80U95 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Ube3cQ80U95 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ube3cQ80U95 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.99■■■□□ 2.55
Ube3cQ80U95 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ube3cQ80U95 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ube3cQ80U95 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ube3cQ80U95 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ube3cQ80U95 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ube3cQ80U95 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ube3cQ80U95 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.96■■■□□ 2.55
Ube3cQ80U95 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Ube3cQ80U95 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ube3cQ80U95 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.95■■■□□ 2.55
Ube3cQ80U95 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Ube3cQ80U95 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ube3cQ80U95 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Ube3cQ80U95 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.88■■■□□ 2.53
Ube3cQ80U95 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.88■■■□□ 2.53
Ube3cQ80U95 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
Ube3cQ80U95 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ube3cQ80U95 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ube3cQ80U95 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ube3cQ80U95 Gm45855-201ENSMUST00000212546 880 ntBASIC30.83■■■□□ 2.53
Ube3cQ80U95 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Ube3cQ80U95 Gm9397-201ENSMUST00000200125 605 ntBASIC30.81■■■□□ 2.52
Ube3cQ80U95 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ube3cQ80U95 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ube3cQ80U95 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.8■■■□□ 2.52
Ube3cQ80U95 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms