Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Prpf38bQ80SY5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Prpf38bQ80SY5 Gm45855-201ENSMUST00000212546 880 ntBASIC27.38■■□□□ 1.97
Prpf38bQ80SY5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Prpf38bQ80SY5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Prpf38bQ80SY5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Prpf38bQ80SY5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Prpf38bQ80SY5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Prpf38bQ80SY5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Prpf38bQ80SY5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.32■■□□□ 1.96
Prpf38bQ80SY5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Prpf38bQ80SY5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Prpf38bQ80SY5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Prpf38bQ80SY5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Prpf38bQ80SY5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Prpf38bQ80SY5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Prpf38bQ80SY5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Prpf38bQ80SY5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.25■■□□□ 1.95
Prpf38bQ80SY5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Prpf38bQ80SY5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Prpf38bQ80SY5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Prpf38bQ80SY5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Prpf38bQ80SY5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Prpf38bQ80SY5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.2■■□□□ 1.94
Prpf38bQ80SY5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Prpf38bQ80SY5 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.17■■□□□ 1.94
Prpf38bQ80SY5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Prpf38bQ80SY5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.17■■□□□ 1.94
Prpf38bQ80SY5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
Prpf38bQ80SY5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Prpf38bQ80SY5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Prpf38bQ80SY5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Prpf38bQ80SY5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Prpf38bQ80SY5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Prpf38bQ80SY5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Prpf38bQ80SY5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.06■■□□□ 1.92
Prpf38bQ80SY5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf38bQ80SY5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf38bQ80SY5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Prpf38bQ80SY5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Prpf38bQ80SY5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Prpf38bQ80SY5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Prpf38bQ80SY5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Prpf38bQ80SY5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Prpf38bQ80SY5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Prpf38bQ80SY5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Prpf38bQ80SY5 Peli2-204ENSMUST00000226513 1320 ntBASIC27■■□□□ 1.91
Prpf38bQ80SY5 Gm9397-201ENSMUST00000200125 605 ntBASIC26.99■■□□□ 1.91
Prpf38bQ80SY5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Prpf38bQ80SY5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Prpf38bQ80SY5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Prpf38bQ80SY5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Prpf38bQ80SY5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Prpf38bQ80SY5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Prpf38bQ80SY5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.93■■□□□ 1.9
Prpf38bQ80SY5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Prpf38bQ80SY5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Prpf38bQ80SY5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.92■■□□□ 1.9
Prpf38bQ80SY5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Prpf38bQ80SY5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Prpf38bQ80SY5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Prpf38bQ80SY5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
Prpf38bQ80SY5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.86■■□□□ 1.89
Prpf38bQ80SY5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Prpf38bQ80SY5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Prpf38bQ80SY5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
Prpf38bQ80SY5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Prpf38bQ80SY5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Prpf38bQ80SY5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Prpf38bQ80SY5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.83■■□□□ 1.89
Prpf38bQ80SY5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Prpf38bQ80SY5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.81■■□□□ 1.88
Prpf38bQ80SY5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Prpf38bQ80SY5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Prpf38bQ80SY5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
Prpf38bQ80SY5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Prpf38bQ80SY5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Prpf38bQ80SY5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.76■■□□□ 1.87
Prpf38bQ80SY5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.76■■□□□ 1.87
Prpf38bQ80SY5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Prpf38bQ80SY5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.74■■□□□ 1.87
Prpf38bQ80SY5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Prpf38bQ80SY5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Prpf38bQ80SY5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.71■■□□□ 1.87
Prpf38bQ80SY5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.7■■□□□ 1.86
Prpf38bQ80SY5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Prpf38bQ80SY5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Prpf38bQ80SY5 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.68■■□□□ 1.86
Prpf38bQ80SY5 Gm8503-201ENSMUST00000118131 455 ntBASIC26.66■■□□□ 1.86
Prpf38bQ80SY5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Prpf38bQ80SY5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Prpf38bQ80SY5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Prpf38bQ80SY5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Prpf38bQ80SY5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Prpf38bQ80SY5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Prpf38bQ80SY5 Zxda-201ENSMUST00000117281 2621 ntBASIC26.6■■□□□ 1.85
Prpf38bQ80SY5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.57■■□□□ 1.84
Prpf38bQ80SY5 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.55■■□□□ 1.84
Prpf38bQ80SY5 Gm24970-201ENSMUST00000175582 82 ntBASIC26.54■■□□□ 1.84
Prpf38bQ80SY5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 6.8 ms