Protein–RNA interactions for Protein: Q6IQX7

Chpf, Chondroitin sulfate synthase 2, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChpfQ6IQX7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
ChpfQ6IQX7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
ChpfQ6IQX7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ChpfQ6IQX7 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.72■■■□□ 2.19
ChpfQ6IQX7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
ChpfQ6IQX7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ChpfQ6IQX7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ChpfQ6IQX7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ChpfQ6IQX7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
ChpfQ6IQX7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ChpfQ6IQX7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.67■■■□□ 2.18
ChpfQ6IQX7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ChpfQ6IQX7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ChpfQ6IQX7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.62■■■□□ 2.17
ChpfQ6IQX7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.62■■■□□ 2.17
ChpfQ6IQX7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.62■■■□□ 2.17
ChpfQ6IQX7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ChpfQ6IQX7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ChpfQ6IQX7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ChpfQ6IQX7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ChpfQ6IQX7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.55■■■□□ 2.16
ChpfQ6IQX7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
ChpfQ6IQX7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.5■■■□□ 2.15
ChpfQ6IQX7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.5■■■□□ 2.15
ChpfQ6IQX7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ChpfQ6IQX7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ChpfQ6IQX7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.44■■■□□ 2.14
ChpfQ6IQX7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ChpfQ6IQX7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ChpfQ6IQX7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
ChpfQ6IQX7 Gm45855-201ENSMUST00000212546 880 ntBASIC28.41■■■□□ 2.14
ChpfQ6IQX7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ChpfQ6IQX7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ChpfQ6IQX7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
ChpfQ6IQX7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ChpfQ6IQX7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ChpfQ6IQX7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ChpfQ6IQX7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.34■■■□□ 2.13
ChpfQ6IQX7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.31■■■□□ 2.12
ChpfQ6IQX7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ChpfQ6IQX7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ChpfQ6IQX7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
ChpfQ6IQX7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ChpfQ6IQX7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ChpfQ6IQX7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ChpfQ6IQX7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ChpfQ6IQX7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ChpfQ6IQX7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ChpfQ6IQX7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ChpfQ6IQX7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ChpfQ6IQX7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
ChpfQ6IQX7 Gm9397-201ENSMUST00000200125 605 ntBASIC28.21■■■□□ 2.11
ChpfQ6IQX7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ChpfQ6IQX7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.18■■■□□ 2.1
ChpfQ6IQX7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
ChpfQ6IQX7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ChpfQ6IQX7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.13■■■□□ 2.09
ChpfQ6IQX7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ChpfQ6IQX7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ChpfQ6IQX7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.11■■■□□ 2.09
ChpfQ6IQX7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.11■■■□□ 2.09
ChpfQ6IQX7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
ChpfQ6IQX7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
ChpfQ6IQX7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
ChpfQ6IQX7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ChpfQ6IQX7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.06■■■□□ 2.08
ChpfQ6IQX7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ChpfQ6IQX7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ChpfQ6IQX7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ChpfQ6IQX7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ChpfQ6IQX7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
ChpfQ6IQX7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ChpfQ6IQX7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ChpfQ6IQX7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ChpfQ6IQX7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
ChpfQ6IQX7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
ChpfQ6IQX7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
ChpfQ6IQX7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28■■■□□ 2.07
ChpfQ6IQX7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ChpfQ6IQX7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ChpfQ6IQX7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
ChpfQ6IQX7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
ChpfQ6IQX7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ChpfQ6IQX7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.96■■■□□ 2.07
ChpfQ6IQX7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.95■■■□□ 2.06
ChpfQ6IQX7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
ChpfQ6IQX7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.94■■■□□ 2.06
ChpfQ6IQX7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ChpfQ6IQX7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
ChpfQ6IQX7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
ChpfQ6IQX7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
ChpfQ6IQX7 Gm24970-201ENSMUST00000175582 82 ntBASIC27.87■■■□□ 2.05
ChpfQ6IQX7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.87■■■□□ 2.05
ChpfQ6IQX7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
ChpfQ6IQX7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
ChpfQ6IQX7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ChpfQ6IQX7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.86■■■□□ 2.05
ChpfQ6IQX7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ChpfQ6IQX7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.86■■■□□ 2.05
ChpfQ6IQX7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms