Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC33.8■■■■□ 3
Col11a2Q64739 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC33.8■■■■□ 3
Col11a2Q64739 Gm45855-201ENSMUST00000212546 880 ntBASIC33.77■■■■□ 3
Col11a2Q64739 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC33.76■■■□□ 2.99
Col11a2Q64739 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC33.75■■■□□ 2.99
Col11a2Q64739 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Col11a2Q64739 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Col11a2Q64739 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33.66■■■□□ 2.98
Col11a2Q64739 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Col11a2Q64739 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Col11a2Q64739 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Col11a2Q64739 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Col11a2Q64739 Gm9397-201ENSMUST00000200125 605 ntBASIC33.57■■■□□ 2.96
Col11a2Q64739 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC33.56■■■□□ 2.96
Col11a2Q64739 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Col11a2Q64739 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC33.54■■■□□ 2.96
Col11a2Q64739 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Col11a2Q64739 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
Col11a2Q64739 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
Col11a2Q64739 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC33.49■■■□□ 2.95
Col11a2Q64739 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Col11a2Q64739 Mipep-204ENSMUST00000225043 1548 ntBASIC33.47■■■□□ 2.95
Col11a2Q64739 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Col11a2Q64739 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC33.45■■■□□ 2.95
Col11a2Q64739 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Col11a2Q64739 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Col11a2Q64739 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Col11a2Q64739 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Col11a2Q64739 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Col11a2Q64739 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33.37■■■□□ 2.93
Col11a2Q64739 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Col11a2Q64739 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
Col11a2Q64739 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Col11a2Q64739 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC33.34■■■□□ 2.93
Col11a2Q64739 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.33■■■□□ 2.93
Col11a2Q64739 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Col11a2Q64739 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Col11a2Q64739 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC33.31■■■□□ 2.92
Col11a2Q64739 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Col11a2Q64739 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Col11a2Q64739 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Col11a2Q64739 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Col11a2Q64739 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC33.27■■■□□ 2.92
Col11a2Q64739 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Col11a2Q64739 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.27■■■□□ 2.92
Col11a2Q64739 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.26■■■□□ 2.92
Col11a2Q64739 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Col11a2Q64739 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC33.22■■■□□ 2.91
Col11a2Q64739 Gm5987-201ENSMUST00000196433 1151 ntBASIC33.2■■■□□ 2.91
Col11a2Q64739 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC33.18■■■□□ 2.9
Col11a2Q64739 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC33.17■■■□□ 2.9
Col11a2Q64739 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC33.16■■■□□ 2.9
Col11a2Q64739 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC33.15■■■□□ 2.9
Col11a2Q64739 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC33.11■■■□□ 2.89
Col11a2Q64739 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
Col11a2Q64739 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Col11a2Q64739 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Col11a2Q64739 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC33.08■■■□□ 2.89
Col11a2Q64739 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Col11a2Q64739 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Col11a2Q64739 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC33.04■■■□□ 2.88
Col11a2Q64739 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Col11a2Q64739 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Col11a2Q64739 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC33■■■□□ 2.87
Col11a2Q64739 Gm24970-201ENSMUST00000175582 82 ntBASIC32.99■■■□□ 2.87
Col11a2Q64739 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Col11a2Q64739 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
Col11a2Q64739 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.95■■■□□ 2.87
Col11a2Q64739 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Col11a2Q64739 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Col11a2Q64739 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.85■■■□□ 2.85
Col11a2Q64739 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.8■■■□□ 2.84
Col11a2Q64739 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Col11a2Q64739 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.8■■■□□ 2.84
Col11a2Q64739 Gm8503-201ENSMUST00000118131 455 ntBASIC32.79■■■□□ 2.84
Col11a2Q64739 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.75■■■□□ 2.83
Col11a2Q64739 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Col11a2Q64739 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.74■■■□□ 2.83
Col11a2Q64739 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Col11a2Q64739 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Col11a2Q64739 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Col11a2Q64739 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Col11a2Q64739 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Col11a2Q64739 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Col11a2Q64739 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.67■■■□□ 2.82
Col11a2Q64739 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Col11a2Q64739 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Col11a2Q64739 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Col11a2Q64739 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Col11a2Q64739 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Col11a2Q64739 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
Col11a2Q64739 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
Col11a2Q64739 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Col11a2Q64739 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Col11a2Q64739 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
Col11a2Q64739 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Col11a2Q64739 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Col11a2Q64739 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
Col11a2Q64739 Gm6821-201ENSMUST00000107540 542 ntBASIC32.56■■■□□ 2.8
Col11a2Q64739 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms