Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Scn9aQ62205 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.55■■■□□ 2.8
Scn9aQ62205 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Scn9aQ62205 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Scn9aQ62205 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.53■■■□□ 2.8
Scn9aQ62205 Gm45855-201ENSMUST00000212546 880 ntBASIC32.51■■■□□ 2.8
Scn9aQ62205 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Scn9aQ62205 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Scn9aQ62205 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Scn9aQ62205 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Scn9aQ62205 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Scn9aQ62205 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Scn9aQ62205 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Scn9aQ62205 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Scn9aQ62205 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Scn9aQ62205 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Scn9aQ62205 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Scn9aQ62205 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Scn9aQ62205 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Scn9aQ62205 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
Scn9aQ62205 Gm9397-201ENSMUST00000200125 605 ntBASIC32.25■■■□□ 2.75
Scn9aQ62205 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Scn9aQ62205 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Scn9aQ62205 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Scn9aQ62205 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.19■■■□□ 2.74
Scn9aQ62205 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Scn9aQ62205 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Scn9aQ62205 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Scn9aQ62205 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
Scn9aQ62205 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.13■■■□□ 2.73
Scn9aQ62205 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32.13■■■□□ 2.73
Scn9aQ62205 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.12■■■□□ 2.73
Scn9aQ62205 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Scn9aQ62205 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Scn9aQ62205 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.11■■■□□ 2.73
Scn9aQ62205 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Scn9aQ62205 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Scn9aQ62205 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
Scn9aQ62205 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Scn9aQ62205 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Scn9aQ62205 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Scn9aQ62205 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.05■■■□□ 2.72
Scn9aQ62205 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Scn9aQ62205 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Scn9aQ62205 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Scn9aQ62205 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Scn9aQ62205 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Scn9aQ62205 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.01■■■□□ 2.71
Scn9aQ62205 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
Scn9aQ62205 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32■■■□□ 2.71
Scn9aQ62205 Mipep-204ENSMUST00000225043 1548 ntBASIC31.99■■■□□ 2.71
Scn9aQ62205 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.99■■■□□ 2.71
Scn9aQ62205 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.98■■■□□ 2.71
Scn9aQ62205 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Scn9aQ62205 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Scn9aQ62205 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Scn9aQ62205 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Scn9aQ62205 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.94■■■□□ 2.7
Scn9aQ62205 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Scn9aQ62205 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.92■■■□□ 2.7
Scn9aQ62205 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Scn9aQ62205 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Scn9aQ62205 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.88■■■□□ 2.69
Scn9aQ62205 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Scn9aQ62205 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Scn9aQ62205 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Scn9aQ62205 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Scn9aQ62205 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.84■■■□□ 2.69
Scn9aQ62205 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.8■■■□□ 2.68
Scn9aQ62205 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.77■■■□□ 2.68
Scn9aQ62205 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Scn9aQ62205 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.76■■■□□ 2.67
Scn9aQ62205 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Scn9aQ62205 Gm24970-201ENSMUST00000175582 82 ntBASIC31.72■■■□□ 2.67
Scn9aQ62205 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Scn9aQ62205 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.67■■■□□ 2.66
Scn9aQ62205 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.67■■■□□ 2.66
Scn9aQ62205 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Scn9aQ62205 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Scn9aQ62205 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Scn9aQ62205 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Scn9aQ62205 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.59■■■□□ 2.65
Scn9aQ62205 Gm8503-201ENSMUST00000118131 455 ntBASIC31.57■■■□□ 2.65
Scn9aQ62205 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.56■■■□□ 2.64
Scn9aQ62205 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.55■■■□□ 2.64
Scn9aQ62205 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Scn9aQ62205 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Scn9aQ62205 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.52■■■□□ 2.64
Scn9aQ62205 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
Scn9aQ62205 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Scn9aQ62205 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Scn9aQ62205 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Scn9aQ62205 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Scn9aQ62205 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Scn9aQ62205 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Scn9aQ62205 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Scn9aQ62205 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Scn9aQ62205 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Scn9aQ62205 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.39■■■□□ 2.62
Scn9aQ62205 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms