Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Scn9aQ62205 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.55■■■□□ 2.8
Scn9aQ62205 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Scn9aQ62205 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Scn9aQ62205 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.53■■■□□ 2.8
Scn9aQ62205 Gm45855-201ENSMUST00000212546 880 ntBASIC32.51■■■□□ 2.8
Scn9aQ62205 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Scn9aQ62205 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Scn9aQ62205 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Scn9aQ62205 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Scn9aQ62205 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Scn9aQ62205 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Scn9aQ62205 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Scn9aQ62205 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Scn9aQ62205 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Scn9aQ62205 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Scn9aQ62205 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Scn9aQ62205 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Scn9aQ62205 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Scn9aQ62205 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
Scn9aQ62205 Gm9397-201ENSMUST00000200125 605 ntBASIC32.25■■■□□ 2.75
Scn9aQ62205 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Scn9aQ62205 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Scn9aQ62205 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Scn9aQ62205 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.19■■■□□ 2.74
Scn9aQ62205 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Scn9aQ62205 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Scn9aQ62205 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Scn9aQ62205 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
Scn9aQ62205 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.13■■■□□ 2.73
Scn9aQ62205 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32.13■■■□□ 2.73
Scn9aQ62205 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.12■■■□□ 2.73
Scn9aQ62205 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Scn9aQ62205 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Scn9aQ62205 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.11■■■□□ 2.73
Scn9aQ62205 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Scn9aQ62205 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Scn9aQ62205 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
Scn9aQ62205 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Scn9aQ62205 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Scn9aQ62205 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Scn9aQ62205 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.05■■■□□ 2.72
Scn9aQ62205 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Scn9aQ62205 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Scn9aQ62205 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Scn9aQ62205 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Scn9aQ62205 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Scn9aQ62205 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.01■■■□□ 2.71
Scn9aQ62205 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
Scn9aQ62205 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32■■■□□ 2.71
Scn9aQ62205 Mipep-204ENSMUST00000225043 1548 ntBASIC31.99■■■□□ 2.71
Scn9aQ62205 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.99■■■□□ 2.71
Scn9aQ62205 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.98■■■□□ 2.71
Scn9aQ62205 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Scn9aQ62205 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Scn9aQ62205 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Scn9aQ62205 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Scn9aQ62205 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.94■■■□□ 2.7
Scn9aQ62205 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Scn9aQ62205 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.92■■■□□ 2.7
Scn9aQ62205 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Scn9aQ62205 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Scn9aQ62205 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.88■■■□□ 2.69
Scn9aQ62205 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Scn9aQ62205 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Scn9aQ62205 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Scn9aQ62205 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Scn9aQ62205 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.84■■■□□ 2.69
Scn9aQ62205 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.8■■■□□ 2.68
Scn9aQ62205 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.77■■■□□ 2.68
Scn9aQ62205 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Scn9aQ62205 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.76■■■□□ 2.67
Scn9aQ62205 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Scn9aQ62205 Gm24970-201ENSMUST00000175582 82 ntBASIC31.72■■■□□ 2.67
Scn9aQ62205 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Scn9aQ62205 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.67■■■□□ 2.66
Scn9aQ62205 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.67■■■□□ 2.66
Scn9aQ62205 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Scn9aQ62205 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Scn9aQ62205 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Scn9aQ62205 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Scn9aQ62205 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.59■■■□□ 2.65
Scn9aQ62205 Gm8503-201ENSMUST00000118131 455 ntBASIC31.57■■■□□ 2.65
Scn9aQ62205 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.56■■■□□ 2.64
Scn9aQ62205 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.55■■■□□ 2.64
Scn9aQ62205 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Scn9aQ62205 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Scn9aQ62205 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.52■■■□□ 2.64
Scn9aQ62205 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
Scn9aQ62205 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Scn9aQ62205 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Scn9aQ62205 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Scn9aQ62205 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Scn9aQ62205 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Scn9aQ62205 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Scn9aQ62205 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Scn9aQ62205 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Scn9aQ62205 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Scn9aQ62205 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.39■■■□□ 2.62
Scn9aQ62205 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms