Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav2Q5R1I9 Peli2-204ENSMUST00000226513 1320 ntBASIC20.96■□□□□ 0.95
Trav2Q5R1I9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav2Q5R1I9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.95■□□□□ 0.94
Trav2Q5R1I9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav2Q5R1I9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav2Q5R1I9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trav2Q5R1I9 Zfp131-205ENSMUST00000223812 663 ntBASIC20.92■□□□□ 0.94
Trav2Q5R1I9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trav2Q5R1I9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav2Q5R1I9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav2Q5R1I9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav2Q5R1I9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav2Q5R1I9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav2Q5R1I9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trav2Q5R1I9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav2Q5R1I9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav2Q5R1I9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav2Q5R1I9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav2Q5R1I9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav2Q5R1I9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav2Q5R1I9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav2Q5R1I9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trav2Q5R1I9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.78■□□□□ 0.92
Trav2Q5R1I9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav2Q5R1I9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav2Q5R1I9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav2Q5R1I9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.73■□□□□ 0.91
Trav2Q5R1I9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.72■□□□□ 0.91
Trav2Q5R1I9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav2Q5R1I9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav2Q5R1I9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav2Q5R1I9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Trav2Q5R1I9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.7■□□□□ 0.9
Trav2Q5R1I9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav2Q5R1I9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav2Q5R1I9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trav2Q5R1I9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav2Q5R1I9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav2Q5R1I9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trav2Q5R1I9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav2Q5R1I9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav2Q5R1I9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Trav2Q5R1I9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.64■□□□□ 0.89
Trav2Q5R1I9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav2Q5R1I9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav2Q5R1I9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.6■□□□□ 0.89
Trav2Q5R1I9 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.6■□□□□ 0.89
Trav2Q5R1I9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Trav2Q5R1I9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trav2Q5R1I9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trav2Q5R1I9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav2Q5R1I9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trav2Q5R1I9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav2Q5R1I9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.55■□□□□ 0.88
Trav2Q5R1I9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav2Q5R1I9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.54■□□□□ 0.88
Trav2Q5R1I9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav2Q5R1I9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trav2Q5R1I9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trav2Q5R1I9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav2Q5R1I9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trav2Q5R1I9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav2Q5R1I9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav2Q5R1I9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav2Q5R1I9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav2Q5R1I9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav2Q5R1I9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav2Q5R1I9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav2Q5R1I9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav2Q5R1I9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav2Q5R1I9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav2Q5R1I9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav2Q5R1I9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav2Q5R1I9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav2Q5R1I9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Trav2Q5R1I9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav2Q5R1I9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav2Q5R1I9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav2Q5R1I9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav2Q5R1I9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav2Q5R1I9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.38■□□□□ 0.85
Trav2Q5R1I9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav2Q5R1I9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav2Q5R1I9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav2Q5R1I9 Gm45855-201ENSMUST00000212546 880 ntBASIC20.36■□□□□ 0.85
Trav2Q5R1I9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav2Q5R1I9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Trav2Q5R1I9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.32■□□□□ 0.84
Trav2Q5R1I9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav2Q5R1I9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.32■□□□□ 0.84
Trav2Q5R1I9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav2Q5R1I9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trav2Q5R1I9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav2Q5R1I9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav2Q5R1I9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trav2Q5R1I9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav2Q5R1I9 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.29■□□□□ 0.84
Trav2Q5R1I9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Trav2Q5R1I9 Gm9397-201ENSMUST00000200125 605 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms