Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Bdp1Q571C7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
Bdp1Q571C7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Bdp1Q571C7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Bdp1Q571C7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Bdp1Q571C7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
Bdp1Q571C7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Bdp1Q571C7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.34■■■□□ 2.13
Bdp1Q571C7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.33■■■□□ 2.13
Bdp1Q571C7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.32■■■□□ 2.12
Bdp1Q571C7 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.32■■■□□ 2.12
Bdp1Q571C7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.32■■■□□ 2.12
Bdp1Q571C7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Bdp1Q571C7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Bdp1Q571C7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.28■■■□□ 2.12
Bdp1Q571C7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Bdp1Q571C7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Bdp1Q571C7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.27■■■□□ 2.12
Bdp1Q571C7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Bdp1Q571C7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Bdp1Q571C7 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.25■■■□□ 2.11
Bdp1Q571C7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Bdp1Q571C7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Bdp1Q571C7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Bdp1Q571C7 Gm8503-201ENSMUST00000118131 455 ntBASIC28.19■■■□□ 2.1
Bdp1Q571C7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Bdp1Q571C7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Bdp1Q571C7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Bdp1Q571C7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.15■■■□□ 2.1
Bdp1Q571C7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.12■■■□□ 2.09
Bdp1Q571C7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.1■■■□□ 2.09
Bdp1Q571C7 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.08■■■□□ 2.09
Bdp1Q571C7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Bdp1Q571C7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.05■■■□□ 2.08
Bdp1Q571C7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Bdp1Q571C7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Bdp1Q571C7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Bdp1Q571C7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Bdp1Q571C7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.97■■■□□ 2.07
Bdp1Q571C7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Bdp1Q571C7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.95■■■□□ 2.06
Bdp1Q571C7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Bdp1Q571C7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.92■■■□□ 2.06
Bdp1Q571C7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Bdp1Q571C7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Bdp1Q571C7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Bdp1Q571C7 Gm24970-201ENSMUST00000175582 82 ntBASIC27.89■■■□□ 2.05
Bdp1Q571C7 Gm6821-201ENSMUST00000107540 542 ntBASIC27.88■■■□□ 2.05
Bdp1Q571C7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Bdp1Q571C7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Bdp1Q571C7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Bdp1Q571C7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Bdp1Q571C7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Bdp1Q571C7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.8■■■□□ 2.04
Bdp1Q571C7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Bdp1Q571C7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Bdp1Q571C7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.75■■■□□ 2.03
Bdp1Q571C7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Bdp1Q571C7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Bdp1Q571C7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Bdp1Q571C7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Bdp1Q571C7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Bdp1Q571C7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.67■■■□□ 2.02
Bdp1Q571C7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.65■■■□□ 2.02
Bdp1Q571C7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
Bdp1Q571C7 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.61■■■□□ 2.01
Bdp1Q571C7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Bdp1Q571C7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Bdp1Q571C7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.56■■■□□ 2
Bdp1Q571C7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.55■■■□□ 2
Bdp1Q571C7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Bdp1Q571C7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Bdp1Q571C7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Bdp1Q571C7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Bdp1Q571C7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Bdp1Q571C7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.45■■□□□ 1.98
Bdp1Q571C7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Bdp1Q571C7 Gm7432-201ENSMUST00000210343 879 ntBASIC27.44■■□□□ 1.98
Bdp1Q571C7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Bdp1Q571C7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.43■■□□□ 1.98
Bdp1Q571C7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.43■■□□□ 1.98
Bdp1Q571C7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Bdp1Q571C7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.42■■□□□ 1.98
Bdp1Q571C7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Bdp1Q571C7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Bdp1Q571C7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.4■■□□□ 1.98
Bdp1Q571C7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Bdp1Q571C7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.39■■□□□ 1.97
Bdp1Q571C7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.39■■□□□ 1.97
Bdp1Q571C7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Bdp1Q571C7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Bdp1Q571C7 Mir6538-201ENSMUST00000183713 110 ntBASIC27.32■■□□□ 1.96
Bdp1Q571C7 Mipep-204ENSMUST00000225043 1548 ntBASIC27.31■■□□□ 1.96
Bdp1Q571C7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.3■■□□□ 1.96
Bdp1Q571C7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Bdp1Q571C7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Bdp1Q571C7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Bdp1Q571C7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Bdp1Q571C7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Bdp1Q571C7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.28■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms