Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Herc2Q4U2R1 Peli2-204ENSMUST00000226513 1320 ntBASIC16.98■□□□□ 0.31
Herc2Q4U2R1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.96■□□□□ 0.31
Herc2Q4U2R1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Herc2Q4U2R1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Herc2Q4U2R1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.93■□□□□ 0.3
Herc2Q4U2R1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.91■□□□□ 0.3
Herc2Q4U2R1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herc2Q4U2R1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc2Q4U2R1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Herc2Q4U2R1 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.88■□□□□ 0.29
Herc2Q4U2R1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc2Q4U2R1 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.86■□□□□ 0.29
Herc2Q4U2R1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Herc2Q4U2R1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc2Q4U2R1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.85■□□□□ 0.29
Herc2Q4U2R1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.85■□□□□ 0.29
Herc2Q4U2R1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Herc2Q4U2R1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Herc2Q4U2R1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.83■□□□□ 0.29
Herc2Q4U2R1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Herc2Q4U2R1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.82■□□□□ 0.28
Herc2Q4U2R1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Herc2Q4U2R1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Herc2Q4U2R1 Gm6821-201ENSMUST00000107540 542 ntBASIC16.8■□□□□ 0.28
Herc2Q4U2R1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Herc2Q4U2R1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.8■□□□□ 0.28
Herc2Q4U2R1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Herc2Q4U2R1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Herc2Q4U2R1 Gm15039-201ENSMUST00000118914 875 ntBASIC16.73■□□□□ 0.27
Herc2Q4U2R1 Gm24970-201ENSMUST00000175582 82 ntBASIC16.72■□□□□ 0.27
Herc2Q4U2R1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Herc2Q4U2R1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Herc2Q4U2R1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Herc2Q4U2R1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.71■□□□□ 0.26
Herc2Q4U2R1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Herc2Q4U2R1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Herc2Q4U2R1 Mir6538-201ENSMUST00000183713 110 ntBASIC16.66■□□□□ 0.26
Herc2Q4U2R1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.65■□□□□ 0.26
Herc2Q4U2R1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Herc2Q4U2R1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Herc2Q4U2R1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herc2Q4U2R1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Herc2Q4U2R1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Herc2Q4U2R1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Herc2Q4U2R1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Herc2Q4U2R1 Psd-208ENSMUST00000224556 2034 ntBASIC16.6■□□□□ 0.25
Herc2Q4U2R1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Herc2Q4U2R1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Herc2Q4U2R1 Gm11175-201ENSMUST00000116172 543 ntBASIC16.57■□□□□ 0.24
Herc2Q4U2R1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Herc2Q4U2R1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Herc2Q4U2R1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Herc2Q4U2R1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Herc2Q4U2R1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.55■□□□□ 0.24
Herc2Q4U2R1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.55■□□□□ 0.24
Herc2Q4U2R1 Gm10524-201ENSMUST00000181931 1893 ntBASIC16.54■□□□□ 0.24
Herc2Q4U2R1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.53■□□□□ 0.24
Herc2Q4U2R1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Herc2Q4U2R1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Herc2Q4U2R1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Herc2Q4U2R1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Herc2Q4U2R1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.51■□□□□ 0.23
Herc2Q4U2R1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Herc2Q4U2R1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.49■□□□□ 0.23
Herc2Q4U2R1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Herc2Q4U2R1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.47■□□□□ 0.23
Herc2Q4U2R1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Herc2Q4U2R1 Cap2-205ENSMUST00000225824 1634 ntBASIC16.47■□□□□ 0.23
Herc2Q4U2R1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.47■□□□□ 0.23
Herc2Q4U2R1 Gm42596-201ENSMUST00000196305 1958 ntBASIC16.47■□□□□ 0.23
Herc2Q4U2R1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.44■□□□□ 0.22
Herc2Q4U2R1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Herc2Q4U2R1 Gm7432-201ENSMUST00000210343 879 ntBASIC16.41■□□□□ 0.22
Herc2Q4U2R1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Herc2Q4U2R1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Herc2Q4U2R1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC16.39■□□□□ 0.21
Herc2Q4U2R1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Herc2Q4U2R1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Herc2Q4U2R1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Herc2Q4U2R1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.38■□□□□ 0.21
Herc2Q4U2R1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Herc2Q4U2R1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Herc2Q4U2R1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Herc2Q4U2R1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Herc2Q4U2R1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Herc2Q4U2R1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Herc2Q4U2R1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
Herc2Q4U2R1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Herc2Q4U2R1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
Herc2Q4U2R1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Herc2Q4U2R1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Herc2Q4U2R1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Herc2Q4U2R1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Herc2Q4U2R1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.32■□□□□ 0.2
Herc2Q4U2R1 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.31■□□□□ 0.2
Herc2Q4U2R1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Herc2Q4U2R1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Herc2Q4U2R1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herc2Q4U2R1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms