Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cks1brtQ3UNC9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cks1brtQ3UNC9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cks1brtQ3UNC9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cks1brtQ3UNC9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cks1brtQ3UNC9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cks1brtQ3UNC9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Cks1brtQ3UNC9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cks1brtQ3UNC9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cks1brtQ3UNC9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cks1brtQ3UNC9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cks1brtQ3UNC9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks1brtQ3UNC9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks1brtQ3UNC9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks1brtQ3UNC9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks1brtQ3UNC9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks1brtQ3UNC9 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.62■□□□□ 0.57
Cks1brtQ3UNC9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cks1brtQ3UNC9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cks1brtQ3UNC9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cks1brtQ3UNC9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cks1brtQ3UNC9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks1brtQ3UNC9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks1brtQ3UNC9 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.6■□□□□ 0.57
Cks1brtQ3UNC9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cks1brtQ3UNC9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cks1brtQ3UNC9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cks1brtQ3UNC9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Cks1brtQ3UNC9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cks1brtQ3UNC9 Gm24109-201ENSMUST00000175489 103 ntBASIC18.58■□□□□ 0.56
Cks1brtQ3UNC9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cks1brtQ3UNC9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cks1brtQ3UNC9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cks1brtQ3UNC9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cks1brtQ3UNC9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cks1brtQ3UNC9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
Cks1brtQ3UNC9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.53■□□□□ 0.56
Cks1brtQ3UNC9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.53■□□□□ 0.56
Cks1brtQ3UNC9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cks1brtQ3UNC9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.51■□□□□ 0.55
Cks1brtQ3UNC9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cks1brtQ3UNC9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1brtQ3UNC9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1brtQ3UNC9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Cks1brtQ3UNC9 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.48■□□□□ 0.55
Cks1brtQ3UNC9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1brtQ3UNC9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cks1brtQ3UNC9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cks1brtQ3UNC9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.44■□□□□ 0.54
Cks1brtQ3UNC9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cks1brtQ3UNC9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1brtQ3UNC9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cks1brtQ3UNC9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cks1brtQ3UNC9 Gm23366-201ENSMUST00000175022 89 ntBASIC18.42■□□□□ 0.54
Cks1brtQ3UNC9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks1brtQ3UNC9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1brtQ3UNC9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1brtQ3UNC9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1brtQ3UNC9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1brtQ3UNC9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cks1brtQ3UNC9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cks1brtQ3UNC9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks1brtQ3UNC9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cks1brtQ3UNC9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cks1brtQ3UNC9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cks1brtQ3UNC9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks1brtQ3UNC9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Cks1brtQ3UNC9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cks1brtQ3UNC9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cks1brtQ3UNC9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cks1brtQ3UNC9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cks1brtQ3UNC9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cks1brtQ3UNC9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cks1brtQ3UNC9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cks1brtQ3UNC9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks1brtQ3UNC9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks1brtQ3UNC9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cks1brtQ3UNC9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cks1brtQ3UNC9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cks1brtQ3UNC9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cks1brtQ3UNC9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks1brtQ3UNC9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Cks1brtQ3UNC9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cks1brtQ3UNC9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.29■□□□□ 0.52
Cks1brtQ3UNC9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cks1brtQ3UNC9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cks1brtQ3UNC9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms