Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush2AQ2QI47 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush2AQ2QI47 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush2AQ2QI47 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ush2AQ2QI47 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.27■□□□□ 0.04
Ush2AQ2QI47 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.27■□□□□ 0.03
Ush2AQ2QI47 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.26■□□□□ 0.03
Ush2AQ2QI47 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC15.25■□□□□ 0.03
Ush2AQ2QI47 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ush2AQ2QI47 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.23■□□□□ 0.03
Ush2AQ2QI47 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.22■□□□□ 0.03
Ush2AQ2QI47 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ush2AQ2QI47 Peli2-204ENSMUST00000226513 1320 ntBASIC15.21■□□□□ 0.03
Ush2AQ2QI47 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ush2AQ2QI47 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ush2AQ2QI47 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ush2AQ2QI47 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.18■□□□□ 0.02
Ush2AQ2QI47 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ush2AQ2QI47 Gm6821-201ENSMUST00000107540 542 ntBASIC15.16■□□□□ 0.02
Ush2AQ2QI47 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush2AQ2QI47 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush2AQ2QI47 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush2AQ2QI47 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.14■□□□□ 0.01
Ush2AQ2QI47 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.12■□□□□ 0.01
Ush2AQ2QI47 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.11■□□□□ 0.01
Ush2AQ2QI47 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ush2AQ2QI47 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush2AQ2QI47 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ush2AQ2QI47 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ush2AQ2QI47 Mir6538-201ENSMUST00000183713 110 ntBASIC15.07■□□□□ 0
Ush2AQ2QI47 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ush2AQ2QI47 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush2AQ2QI47 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ush2AQ2QI47 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ush2AQ2QI47 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush2AQ2QI47 Gm24970-201ENSMUST00000175582 82 ntBASIC15.04■□□□□ -0
Ush2AQ2QI47 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush2AQ2QI47 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ush2AQ2QI47 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
Ush2AQ2QI47 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.01□□□□□ -0.01
Ush2AQ2QI47 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush2AQ2QI47 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush2AQ2QI47 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15□□□□□ -0.01
Ush2AQ2QI47 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush2AQ2QI47 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ush2AQ2QI47 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.99□□□□□ -0.01
Ush2AQ2QI47 Gm11175-201ENSMUST00000116172 543 ntBASIC14.99□□□□□ -0.01
Ush2AQ2QI47 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ush2AQ2QI47 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.96□□□□□ -0.01
Ush2AQ2QI47 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ush2AQ2QI47 Cap2-205ENSMUST00000225824 1634 ntBASIC14.96□□□□□ -0.01
Ush2AQ2QI47 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ush2AQ2QI47 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.94□□□□□ -0.02
Ush2AQ2QI47 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.93□□□□□ -0.02
Ush2AQ2QI47 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ush2AQ2QI47 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ush2AQ2QI47 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush2AQ2QI47 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ush2AQ2QI47 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.87□□□□□ -0.03
Ush2AQ2QI47 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ush2AQ2QI47 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ush2AQ2QI47 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Ush2AQ2QI47 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ush2AQ2QI47 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.84□□□□□ -0.03
Ush2AQ2QI47 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ush2AQ2QI47 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ush2AQ2QI47 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ush2AQ2QI47 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ush2AQ2QI47 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ush2AQ2QI47 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ush2AQ2QI47 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ush2AQ2QI47 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC14.8□□□□□ -0.04
Ush2AQ2QI47 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ush2AQ2QI47 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ush2AQ2QI47 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ush2AQ2QI47 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ush2AQ2QI47 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Ush2AQ2QI47 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ush2AQ2QI47 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ush2AQ2QI47 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC14.74□□□□□ -0.05
Ush2AQ2QI47 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ush2AQ2QI47 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ush2AQ2QI47 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.73□□□□□ -0.05
Ush2AQ2QI47 Gm10524-201ENSMUST00000181931 1893 ntBASIC14.72□□□□□ -0.05
Ush2AQ2QI47 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ush2AQ2QI47 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ush2AQ2QI47 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ush2AQ2QI47 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.71□□□□□ -0.05
Ush2AQ2QI47 Gm7432-201ENSMUST00000210343 879 ntBASIC14.71□□□□□ -0.05
Ush2AQ2QI47 Psd-208ENSMUST00000224556 2034 ntBASIC14.7□□□□□ -0.06
Ush2AQ2QI47 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ush2AQ2QI47 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.7□□□□□ -0.06
Ush2AQ2QI47 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ush2AQ2QI47 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ush2AQ2QI47 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ush2AQ2QI47 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ush2AQ2QI47 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ush2AQ2QI47 Gm42596-201ENSMUST00000196305 1958 ntBASIC14.66□□□□□ -0.06
Ush2AQ2QI47 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC14.66□□□□□ -0.06
Ush2AQ2QI47 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms